Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF34Q969K3 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF34Q969K3 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.34■□□□□ 0.37
RNF34Q969K3 UPF3AP3-201ENST00000420996 769 ntBASIC17.34■□□□□ 0.37
RNF34Q969K3 HTR5BP-201ENST00000430851 1154 ntBASIC17.34■□□□□ 0.37
RNF34Q969K3 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.34■□□□□ 0.37
RNF34Q969K3 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.34■□□□□ 0.37
RNF34Q969K3 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.34■□□□□ 0.37
RNF34Q969K3 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF34Q969K3 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.34■□□□□ 0.37
RNF34Q969K3 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF34Q969K3 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.34■□□□□ 0.37
RNF34Q969K3 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF34Q969K3 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.34■□□□□ 0.37
RNF34Q969K3 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF34Q969K3 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF34Q969K3 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.34■□□□□ 0.37
RNF34Q969K3 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
RNF34Q969K3 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC17.34■□□□□ 0.37
RNF34Q969K3 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF34Q969K3 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF34Q969K3 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.33■□□□□ 0.37
RNF34Q969K3 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF34Q969K3 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.33■□□□□ 0.37
RNF34Q969K3 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.33■□□□□ 0.37
RNF34Q969K3 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF34Q969K3 SNX33P1-201ENST00000592116 1762 ntBASIC17.33■□□□□ 0.37
RNF34Q969K3 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RNF34Q969K3 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RNF34Q969K3 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.33■□□□□ 0.37
RNF34Q969K3 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF34Q969K3 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.33■□□□□ 0.37
RNF34Q969K3 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF34Q969K3 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF34Q969K3 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.33■□□□□ 0.36
RNF34Q969K3 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
RNF34Q969K3 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
RNF34Q969K3 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.33■□□□□ 0.36
RNF34Q969K3 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.33■□□□□ 0.36
RNF34Q969K3 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.33■□□□□ 0.36
RNF34Q969K3 AC112482.1-201ENST00000492080 688 ntBASIC17.33■□□□□ 0.36
RNF34Q969K3 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
RNF34Q969K3 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
RNF34Q969K3 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RNF34Q969K3 AL161645.1-201ENST00000622716 1255 ntBASIC17.33■□□□□ 0.36
RNF34Q969K3 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF34Q969K3 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF34Q969K3 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
RNF34Q969K3 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF34Q969K3 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.33■□□□□ 0.36
RNF34Q969K3 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF34Q969K3 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF34Q969K3 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.33■□□□□ 0.36
RNF34Q969K3 HLA-A-202ENST00000376806 1854 ntBASIC17.33■□□□□ 0.36
RNF34Q969K3 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF34Q969K3 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF34Q969K3 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.33■□□□□ 0.36
RNF34Q969K3 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
RNF34Q969K3 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF34Q969K3 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.32■□□□□ 0.36
RNF34Q969K3 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
RNF34Q969K3 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RNF34Q969K3 AC009053.2-201ENST00000563701 2365 ntBASIC17.32■□□□□ 0.36
RNF34Q969K3 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
RNF34Q969K3 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF34Q969K3 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF34Q969K3 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF34Q969K3 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF34Q969K3 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF34Q969K3 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF34Q969K3 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF34Q969K3 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF34Q969K3 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF34Q969K3 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.32■□□□□ 0.36
RNF34Q969K3 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF34Q969K3 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF34Q969K3 GPX1P2-201ENST00000429271 606 ntBASIC17.32■□□□□ 0.36
RNF34Q969K3 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.32■□□□□ 0.36
RNF34Q969K3 CEND1P1-201ENST00000451006 455 ntBASIC17.32■□□□□ 0.36
RNF34Q969K3 HLA-J-202ENST00000469281 1241 ntBASIC17.32■□□□□ 0.36
RNF34Q969K3 ALG1L5P-201ENST00000482043 771 ntBASIC17.32■□□□□ 0.36
RNF34Q969K3 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF34Q969K3 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF34Q969K3 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.32■□□□□ 0.36
RNF34Q969K3 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.32■□□□□ 0.36
RNF34Q969K3 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.32■□□□□ 0.36
RNF34Q969K3 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF34Q969K3 AC006538.3-201ENST00000612495 578 ntBASIC17.32■□□□□ 0.36
RNF34Q969K3 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.32■□□□□ 0.36
RNF34Q969K3 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF34Q969K3 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF34Q969K3 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF34Q969K3 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.32■□□□□ 0.36
RNF34Q969K3 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF34Q969K3 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF34Q969K3 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
RNF34Q969K3 AC068587.6-202ENST00000641839 5619 ntBASIC17.32■□□□□ 0.36
RNF34Q969K3 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF34Q969K3 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF34Q969K3 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms