Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC14.92□□□□□ -0.02
PTP4A1Q93096 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTP4A1Q93096 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.92□□□□□ -0.02
PTP4A1Q93096 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PTP4A1Q93096 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.92□□□□□ -0.02
PTP4A1Q93096 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC14.92□□□□□ -0.02
PTP4A1Q93096 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.92□□□□□ -0.02
PTP4A1Q93096 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
PTP4A1Q93096 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.92□□□□□ -0.02
PTP4A1Q93096 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTP4A1Q93096 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTP4A1Q93096 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTP4A1Q93096 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC14.92□□□□□ -0.02
PTP4A1Q93096 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTP4A1Q93096 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.92□□□□□ -0.02
PTP4A1Q93096 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTP4A1Q93096 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTP4A1Q93096 SLC22A20-204ENST00000530038 1673 ntBASIC14.92□□□□□ -0.02
PTP4A1Q93096 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTP4A1Q93096 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTP4A1Q93096 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
PTP4A1Q93096 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PTP4A1Q93096 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTP4A1Q93096 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
PTP4A1Q93096 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTP4A1Q93096 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTP4A1Q93096 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
PTP4A1Q93096 PI4KAP1-204ENST00000612579 1703 ntBASIC14.92□□□□□ -0.02
PTP4A1Q93096 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTP4A1Q93096 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTP4A1Q93096 AC099063.4-201ENST00000641099 1602 ntBASIC14.92□□□□□ -0.02
PTP4A1Q93096 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTP4A1Q93096 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTP4A1Q93096 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTP4A1Q93096 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
PTP4A1Q93096 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTP4A1Q93096 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTP4A1Q93096 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTP4A1Q93096 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTP4A1Q93096 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PTP4A1Q93096 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PTP4A1Q93096 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.91□□□□□ -0.02
PTP4A1Q93096 REXO1L8P-201ENST00000604378 1897 ntBASIC14.91□□□□□ -0.02
PTP4A1Q93096 PCGF3-213ENST00000620529 1899 ntBASIC14.91□□□□□ -0.02
PTP4A1Q93096 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.91□□□□□ -0.02
PTP4A1Q93096 GPAA1P2-202ENST00000606848 1787 ntBASIC14.91□□□□□ -0.02
PTP4A1Q93096 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.91□□□□□ -0.02
PTP4A1Q93096 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTP4A1Q93096 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PTP4A1Q93096 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.91□□□□□ -0.02
PTP4A1Q93096 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
PTP4A1Q93096 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTP4A1Q93096 AKR1C7P-201ENST00000305623 895 ntBASIC14.91□□□□□ -0.02
PTP4A1Q93096 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.91□□□□□ -0.02
PTP4A1Q93096 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC14.91□□□□□ -0.02
PTP4A1Q93096 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC14.91□□□□□ -0.02
PTP4A1Q93096 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PTP4A1Q93096 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC14.91□□□□□ -0.02
PTP4A1Q93096 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PTP4A1Q93096 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC14.91□□□□□ -0.02
PTP4A1Q93096 FGFR3P6-201ENST00000457012 610 ntBASIC14.91□□□□□ -0.02
PTP4A1Q93096 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.91□□□□□ -0.02
PTP4A1Q93096 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC14.91□□□□□ -0.02
PTP4A1Q93096 SLC25A6P2-201ENST00000497974 877 ntBASIC14.91□□□□□ -0.02
PTP4A1Q93096 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PTP4A1Q93096 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC14.91□□□□□ -0.02
PTP4A1Q93096 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.91□□□□□ -0.02
PTP4A1Q93096 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.91□□□□□ -0.02
PTP4A1Q93096 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC14.91□□□□□ -0.02
PTP4A1Q93096 AC091167.2-201ENST00000579581 588 ntBASIC14.91□□□□□ -0.02
PTP4A1Q93096 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PTP4A1Q93096 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTP4A1Q93096 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.91□□□□□ -0.02
PTP4A1Q93096 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
PTP4A1Q93096 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PTP4A1Q93096 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTP4A1Q93096 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.91□□□□□ -0.02
PTP4A1Q93096 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.91□□□□□ -0.02
PTP4A1Q93096 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
PTP4A1Q93096 LINC01144-201ENST00000626198 1710 ntBASIC14.91□□□□□ -0.02
PTP4A1Q93096 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTP4A1Q93096 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
PTP4A1Q93096 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PTP4A1Q93096 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.91□□□□□ -0.02
PTP4A1Q93096 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTP4A1Q93096 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTP4A1Q93096 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTP4A1Q93096 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTP4A1Q93096 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.91□□□□□ -0.02
PTP4A1Q93096 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PTP4A1Q93096 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.91□□□□□ -0.02
PTP4A1Q93096 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PTP4A1Q93096 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTP4A1Q93096 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.9□□□□□ -0.02
PTP4A1Q93096 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.9□□□□□ -0.02
PTP4A1Q93096 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.9□□□□□ -0.02
PTP4A1Q93096 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PTP4A1Q93096 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTP4A1Q93096 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.9□□□□□ -0.02
PTP4A1Q93096 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms