Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.37■□□□□ 0.37
SHKBP1Q8TBC3 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SHKBP1Q8TBC3 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.37■□□□□ 0.37
SHKBP1Q8TBC3 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.37■□□□□ 0.37
SHKBP1Q8TBC3 AC092053.1-201ENST00000605787 1936 ntBASIC17.37■□□□□ 0.37
SHKBP1Q8TBC3 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SHKBP1Q8TBC3 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SHKBP1Q8TBC3 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.36■□□□□ 0.37
SHKBP1Q8TBC3 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SHKBP1Q8TBC3 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SHKBP1Q8TBC3 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SHKBP1Q8TBC3 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SHKBP1Q8TBC3 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
SHKBP1Q8TBC3 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SHKBP1Q8TBC3 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.36■□□□□ 0.37
SHKBP1Q8TBC3 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
SHKBP1Q8TBC3 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SHKBP1Q8TBC3 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SHKBP1Q8TBC3 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SHKBP1Q8TBC3 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC17.36■□□□□ 0.37
SHKBP1Q8TBC3 TAF8-206ENST00000472818 719 ntTSL 2 BASIC17.36■□□□□ 0.37
SHKBP1Q8TBC3 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.36■□□□□ 0.37
SHKBP1Q8TBC3 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.36■□□□□ 0.37
SHKBP1Q8TBC3 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.36■□□□□ 0.37
SHKBP1Q8TBC3 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.36■□□□□ 0.37
SHKBP1Q8TBC3 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SHKBP1Q8TBC3 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.36■□□□□ 0.37
SHKBP1Q8TBC3 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SHKBP1Q8TBC3 LINC02199-201ENST00000506655 2702 ntBASIC17.36■□□□□ 0.37
SHKBP1Q8TBC3 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SHKBP1Q8TBC3 PCDHA14-201ENST00000506751 2298 ntBASIC17.36■□□□□ 0.37
SHKBP1Q8TBC3 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SHKBP1Q8TBC3 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.36■□□□□ 0.37
SHKBP1Q8TBC3 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SHKBP1Q8TBC3 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SHKBP1Q8TBC3 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
SHKBP1Q8TBC3 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SHKBP1Q8TBC3 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
SHKBP1Q8TBC3 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHKBP1Q8TBC3 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SHKBP1Q8TBC3 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHKBP1Q8TBC3 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHKBP1Q8TBC3 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.35■□□□□ 0.37
SHKBP1Q8TBC3 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SHKBP1Q8TBC3 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SHKBP1Q8TBC3 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.35■□□□□ 0.37
SHKBP1Q8TBC3 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SHKBP1Q8TBC3 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHKBP1Q8TBC3 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHKBP1Q8TBC3 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHKBP1Q8TBC3 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.35■□□□□ 0.37
SHKBP1Q8TBC3 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.35■□□□□ 0.37
SHKBP1Q8TBC3 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.35■□□□□ 0.37
SHKBP1Q8TBC3 PNKD-204ENST00000436005 978 ntTSL 5 BASIC17.35■□□□□ 0.37
SHKBP1Q8TBC3 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.35■□□□□ 0.37
SHKBP1Q8TBC3 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SHKBP1Q8TBC3 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.35■□□□□ 0.37
SHKBP1Q8TBC3 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SHKBP1Q8TBC3 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.35■□□□□ 0.37
SHKBP1Q8TBC3 RARRES2P9-201ENST00000565168 469 ntBASIC17.35■□□□□ 0.37
SHKBP1Q8TBC3 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.35■□□□□ 0.37
SHKBP1Q8TBC3 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.35■□□□□ 0.37
SHKBP1Q8TBC3 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.35■□□□□ 0.37
SHKBP1Q8TBC3 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SHKBP1Q8TBC3 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHKBP1Q8TBC3 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.35■□□□□ 0.37
SHKBP1Q8TBC3 AP3S2-216ENST00000617003 1561 ntBASIC17.35■□□□□ 0.37
SHKBP1Q8TBC3 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHKBP1Q8TBC3 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHKBP1Q8TBC3 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHKBP1Q8TBC3 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHKBP1Q8TBC3 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHKBP1Q8TBC3 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SHKBP1Q8TBC3 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SHKBP1Q8TBC3 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
SHKBP1Q8TBC3 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHKBP1Q8TBC3 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SHKBP1Q8TBC3 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHKBP1Q8TBC3 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
SHKBP1Q8TBC3 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHKBP1Q8TBC3 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHKBP1Q8TBC3 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHKBP1Q8TBC3 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHKBP1Q8TBC3 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHKBP1Q8TBC3 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHKBP1Q8TBC3 TUBB8P12-201ENST00000308911 1335 ntBASIC17.34■□□□□ 0.37
SHKBP1Q8TBC3 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SHKBP1Q8TBC3 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.34■□□□□ 0.37
SHKBP1Q8TBC3 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHKBP1Q8TBC3 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.34■□□□□ 0.37
SHKBP1Q8TBC3 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHKBP1Q8TBC3 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHKBP1Q8TBC3 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHKBP1Q8TBC3 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.34■□□□□ 0.37
SHKBP1Q8TBC3 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SHKBP1Q8TBC3 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.34■□□□□ 0.37
SHKBP1Q8TBC3 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC17.34■□□□□ 0.37
SHKBP1Q8TBC3 TUBB7P-202ENST00000428444 1305 ntBASIC17.34■□□□□ 0.37
SHKBP1Q8TBC3 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SHKBP1Q8TBC3 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms