Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SNIP1Q8TAD8 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.59■□□□□ 0.09
SNIP1Q8TAD8 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.58■□□□□ 0.09
SNIP1Q8TAD8 FZD10-202ENST00000539839 3282 ntBASIC15.58■□□□□ 0.09
SNIP1Q8TAD8 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
SNIP1Q8TAD8 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.58■□□□□ 0.09
SNIP1Q8TAD8 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.58■□□□□ 0.09
SNIP1Q8TAD8 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
SNIP1Q8TAD8 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
SNIP1Q8TAD8 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.58■□□□□ 0.08
SNIP1Q8TAD8 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SNIP1Q8TAD8 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.58■□□□□ 0.08
SNIP1Q8TAD8 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
SNIP1Q8TAD8 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SNIP1Q8TAD8 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SNIP1Q8TAD8 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.58■□□□□ 0.08
SNIP1Q8TAD8 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SNIP1Q8TAD8 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.58■□□□□ 0.08
SNIP1Q8TAD8 AC234783.1-201ENST00000441761 496 ntBASIC15.58■□□□□ 0.08
SNIP1Q8TAD8 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.58■□□□□ 0.08
SNIP1Q8TAD8 PACS1-203ENST00000524815 628 ntTSL 4 BASIC15.58■□□□□ 0.08
SNIP1Q8TAD8 BANF1P1-201ENST00000553684 263 ntBASIC15.58■□□□□ 0.08
SNIP1Q8TAD8 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.58■□□□□ 0.08
SNIP1Q8TAD8 AL133215.2-201ENST00000609242 977 ntBASIC15.58■□□□□ 0.08
SNIP1Q8TAD8 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SNIP1Q8TAD8 UBE2Q2P6-202ENST00000617217 443 ntTSL 5 BASIC15.58■□□□□ 0.08
SNIP1Q8TAD8 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.58■□□□□ 0.08
SNIP1Q8TAD8 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.58■□□□□ 0.08
SNIP1Q8TAD8 COX11-210ENST00000639671 696 ntBASIC15.58■□□□□ 0.08
SNIP1Q8TAD8 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.58■□□□□ 0.08
SNIP1Q8TAD8 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SNIP1Q8TAD8 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SNIP1Q8TAD8 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SNIP1Q8TAD8 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
SNIP1Q8TAD8 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SNIP1Q8TAD8 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SNIP1Q8TAD8 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
SNIP1Q8TAD8 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SNIP1Q8TAD8 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SNIP1Q8TAD8 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SNIP1Q8TAD8 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SNIP1Q8TAD8 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
SNIP1Q8TAD8 LYSMD4-203ENST00000378904 2122 ntBASIC15.58■□□□□ 0.08
SNIP1Q8TAD8 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
SNIP1Q8TAD8 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.58■□□□□ 0.08
SNIP1Q8TAD8 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SNIP1Q8TAD8 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC15.57■□□□□ 0.08
SNIP1Q8TAD8 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
SNIP1Q8TAD8 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SNIP1Q8TAD8 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SNIP1Q8TAD8 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
SNIP1Q8TAD8 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
SNIP1Q8TAD8 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
SNIP1Q8TAD8 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC15.57■□□□□ 0.08
SNIP1Q8TAD8 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SNIP1Q8TAD8 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SNIP1Q8TAD8 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SNIP1Q8TAD8 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SNIP1Q8TAD8 LST1-205ENST00000376089 680 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SNIP1Q8TAD8 LST1-206ENST00000376090 689 ntTSL 2 BASIC15.57■□□□□ 0.08
SNIP1Q8TAD8 LST1-208ENST00000376093 648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SNIP1Q8TAD8 LST1-209ENST00000376096 565 ntTSL 2 BASIC15.57■□□□□ 0.08
SNIP1Q8TAD8 LST1-210ENST00000376099 610 ntTSL 2 BASIC15.57■□□□□ 0.08
SNIP1Q8TAD8 LST1-212ENST00000396101 459 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SNIP1Q8TAD8 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.57■□□□□ 0.08
SNIP1Q8TAD8 LST1-214ENST00000418507 726 ntTSL 2 BASIC15.57■□□□□ 0.08
SNIP1Q8TAD8 LST1-217ENST00000438075 764 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
SNIP1Q8TAD8 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC15.57■□□□□ 0.08
SNIP1Q8TAD8 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.57■□□□□ 0.08
SNIP1Q8TAD8 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.57■□□□□ 0.08
SNIP1Q8TAD8 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SNIP1Q8TAD8 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.57■□□□□ 0.08
SNIP1Q8TAD8 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.57■□□□□ 0.08
SNIP1Q8TAD8 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.57■□□□□ 0.08
SNIP1Q8TAD8 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.57■□□□□ 0.08
SNIP1Q8TAD8 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
SNIP1Q8TAD8 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SNIP1Q8TAD8 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.57■□□□□ 0.08
SNIP1Q8TAD8 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SNIP1Q8TAD8 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SNIP1Q8TAD8 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
SNIP1Q8TAD8 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
SNIP1Q8TAD8 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.57■□□□□ 0.08
SNIP1Q8TAD8 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
SNIP1Q8TAD8 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SNIP1Q8TAD8 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SNIP1Q8TAD8 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
SNIP1Q8TAD8 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SNIP1Q8TAD8 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC15.57■□□□□ 0.08
SNIP1Q8TAD8 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SNIP1Q8TAD8 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.57■□□□□ 0.08
SNIP1Q8TAD8 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SNIP1Q8TAD8 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SNIP1Q8TAD8 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
SNIP1Q8TAD8 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
SNIP1Q8TAD8 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
SNIP1Q8TAD8 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SNIP1Q8TAD8 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SNIP1Q8TAD8 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SNIP1Q8TAD8 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms