Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 USE1-206ENST00000595101 1776 ntTSL 2 BASIC21.62■■□□□ 1.05
COL22A1Q8NFW1 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
COL22A1Q8NFW1 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL22A1Q8NFW1 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL22A1Q8NFW1 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
COL22A1Q8NFW1 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
COL22A1Q8NFW1 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
COL22A1Q8NFW1 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
COL22A1Q8NFW1 AC093433.1-201ENST00000458048 571 ntBASIC21.62■■□□□ 1.05
COL22A1Q8NFW1 AKR7A2P1-201ENST00000460134 915 ntBASIC21.62■■□□□ 1.05
COL22A1Q8NFW1 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC21.62■■□□□ 1.05
COL22A1Q8NFW1 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC21.62■■□□□ 1.05
COL22A1Q8NFW1 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC21.62■■□□□ 1.05
COL22A1Q8NFW1 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
COL22A1Q8NFW1 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC21.62■■□□□ 1.05
COL22A1Q8NFW1 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
COL22A1Q8NFW1 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
COL22A1Q8NFW1 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL22A1Q8NFW1 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC21.61■■□□□ 1.05
COL22A1Q8NFW1 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL22A1Q8NFW1 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL22A1Q8NFW1 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL22A1Q8NFW1 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
COL22A1Q8NFW1 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL22A1Q8NFW1 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
COL22A1Q8NFW1 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC21.61■■□□□ 1.05
COL22A1Q8NFW1 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL22A1Q8NFW1 BX284668.4-201ENST00000453917 508 ntBASIC21.61■■□□□ 1.05
COL22A1Q8NFW1 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC21.61■■□□□ 1.05
COL22A1Q8NFW1 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC21.61■■□□□ 1.05
COL22A1Q8NFW1 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
COL22A1Q8NFW1 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
COL22A1Q8NFW1 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
COL22A1Q8NFW1 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC21.61■■□□□ 1.05
COL22A1Q8NFW1 MIR3619-201ENST00000579667 83 ntBASIC21.61■■□□□ 1.05
COL22A1Q8NFW1 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
COL22A1Q8NFW1 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
COL22A1Q8NFW1 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
COL22A1Q8NFW1 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC21.6■■□□□ 1.05
COL22A1Q8NFW1 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL22A1Q8NFW1 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL22A1Q8NFW1 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL22A1Q8NFW1 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL22A1Q8NFW1 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL22A1Q8NFW1 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC21.6■■□□□ 1.05
COL22A1Q8NFW1 AGER-206ENST00000375070 1463 ntTSL 5 BASIC21.6■■□□□ 1.05
COL22A1Q8NFW1 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
COL22A1Q8NFW1 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL22A1Q8NFW1 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL22A1Q8NFW1 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
COL22A1Q8NFW1 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
COL22A1Q8NFW1 KRT18P64-201ENST00000434946 1219 ntBASIC21.6■■□□□ 1.05
COL22A1Q8NFW1 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC21.6■■□□□ 1.05
COL22A1Q8NFW1 AC245100.5-201ENST00000452108 331 ntBASIC21.6■■□□□ 1.05
COL22A1Q8NFW1 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL22A1Q8NFW1 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC21.6■■□□□ 1.05
COL22A1Q8NFW1 HNRNPA1P48-202ENST00000565308 961 ntBASIC21.6■■□□□ 1.05
COL22A1Q8NFW1 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC21.6■■□□□ 1.05
COL22A1Q8NFW1 BOC-212ENST00000485230 2173 ntTSL 2 BASIC21.6■■□□□ 1.05
COL22A1Q8NFW1 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL22A1Q8NFW1 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL22A1Q8NFW1 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
COL22A1Q8NFW1 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC21.6■■□□□ 1.05
COL22A1Q8NFW1 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL22A1Q8NFW1 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL22A1Q8NFW1 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL22A1Q8NFW1 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
COL22A1Q8NFW1 GUK1-206ENST00000366723 845 ntTSL 5 BASIC21.59■■□□□ 1.05
COL22A1Q8NFW1 AC104457.1-201ENST00000401024 814 ntBASIC21.59■■□□□ 1.05
COL22A1Q8NFW1 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL22A1Q8NFW1 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
COL22A1Q8NFW1 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
COL22A1Q8NFW1 AHRR-211ENST00000515206 462 ntTSL 5 BASIC21.59■■□□□ 1.05
COL22A1Q8NFW1 AC138627.1-207ENST00000641560 1006 ntBASIC21.59■■□□□ 1.05
COL22A1Q8NFW1 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL22A1Q8NFW1 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
COL22A1Q8NFW1 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC21.59■■□□□ 1.05
COL22A1Q8NFW1 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.59■■□□□ 1.05
COL22A1Q8NFW1 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
COL22A1Q8NFW1 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL22A1Q8NFW1 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC21.59■■□□□ 1.05
COL22A1Q8NFW1 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
COL22A1Q8NFW1 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC21.58■■□□□ 1.05
COL22A1Q8NFW1 CSH2-202ENST00000345366 598 ntTSL 5 BASIC21.58■■□□□ 1.05
COL22A1Q8NFW1 TEX30-203ENST00000376022 828 ntTSL 2 BASIC21.58■■□□□ 1.05
COL22A1Q8NFW1 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC21.58■■□□□ 1.05
COL22A1Q8NFW1 LDHBP1-201ENST00000455730 1119 ntBASIC21.58■■□□□ 1.05
COL22A1Q8NFW1 APOA2-204ENST00000464492 530 ntTSL 3 BASIC21.58■■□□□ 1.05
COL22A1Q8NFW1 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC21.58■■□□□ 1.05
COL22A1Q8NFW1 SPCS2P2-201ENST00000603270 608 ntBASIC21.58■■□□□ 1.05
COL22A1Q8NFW1 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
COL22A1Q8NFW1 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC21.58■■□□□ 1.05
COL22A1Q8NFW1 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
COL22A1Q8NFW1 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
COL22A1Q8NFW1 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
COL22A1Q8NFW1 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
COL22A1Q8NFW1 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
COL22A1Q8NFW1 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC21.58■■□□□ 1.04
COL22A1Q8NFW1 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
COL22A1Q8NFW1 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms