Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NUP43Q8NFH3 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NUP43Q8NFH3 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
NUP43Q8NFH3 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.52■□□□□ 0.08
NUP43Q8NFH3 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.52■□□□□ 0.08
NUP43Q8NFH3 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.52■□□□□ 0.08
NUP43Q8NFH3 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.52■□□□□ 0.08
NUP43Q8NFH3 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
NUP43Q8NFH3 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.52■□□□□ 0.08
NUP43Q8NFH3 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.52■□□□□ 0.08
NUP43Q8NFH3 AL031055.1-201ENST00000606362 631 ntBASIC15.52■□□□□ 0.08
NUP43Q8NFH3 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.52■□□□□ 0.08
NUP43Q8NFH3 AC020765.3-201ENST00000613051 740 ntBASIC15.52■□□□□ 0.08
NUP43Q8NFH3 AC010507.1-201ENST00000633895 436 ntBASIC15.52■□□□□ 0.08
NUP43Q8NFH3 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NUP43Q8NFH3 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NUP43Q8NFH3 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NUP43Q8NFH3 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.52■□□□□ 0.07
NUP43Q8NFH3 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.52■□□□□ 0.07
NUP43Q8NFH3 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.52■□□□□ 0.07
NUP43Q8NFH3 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.52■□□□□ 0.07
NUP43Q8NFH3 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NUP43Q8NFH3 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.52■□□□□ 0.07
NUP43Q8NFH3 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NUP43Q8NFH3 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.07
NUP43Q8NFH3 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NUP43Q8NFH3 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NUP43Q8NFH3 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
NUP43Q8NFH3 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
NUP43Q8NFH3 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.51■□□□□ 0.07
NUP43Q8NFH3 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
NUP43Q8NFH3 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NUP43Q8NFH3 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.51■□□□□ 0.07
NUP43Q8NFH3 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NUP43Q8NFH3 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.51■□□□□ 0.07
NUP43Q8NFH3 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.51■□□□□ 0.07
NUP43Q8NFH3 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NUP43Q8NFH3 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.51■□□□□ 0.07
NUP43Q8NFH3 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
NUP43Q8NFH3 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NUP43Q8NFH3 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NUP43Q8NFH3 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NUP43Q8NFH3 RNU1-129P-201ENST00000384064 167 ntBASIC15.51■□□□□ 0.07
NUP43Q8NFH3 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
NUP43Q8NFH3 AC145285.3-201ENST00000564603 959 ntBASIC15.51■□□□□ 0.07
NUP43Q8NFH3 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.51■□□□□ 0.07
NUP43Q8NFH3 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.51■□□□□ 0.07
NUP43Q8NFH3 U1.21-201ENST00000580816 167 ntBASIC15.51■□□□□ 0.07
NUP43Q8NFH3 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.51■□□□□ 0.07
NUP43Q8NFH3 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NUP43Q8NFH3 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.51■□□□□ 0.07
NUP43Q8NFH3 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NUP43Q8NFH3 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NUP43Q8NFH3 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NUP43Q8NFH3 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
NUP43Q8NFH3 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.51■□□□□ 0.07
NUP43Q8NFH3 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
NUP43Q8NFH3 AC026691.1-201ENST00000602502 2017 ntBASIC15.51■□□□□ 0.07
NUP43Q8NFH3 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
NUP43Q8NFH3 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
NUP43Q8NFH3 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NUP43Q8NFH3 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
NUP43Q8NFH3 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
NUP43Q8NFH3 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.51■□□□□ 0.07
NUP43Q8NFH3 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
NUP43Q8NFH3 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NUP43Q8NFH3 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
NUP43Q8NFH3 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NUP43Q8NFH3 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.5■□□□□ 0.07
NUP43Q8NFH3 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NUP43Q8NFH3 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.5■□□□□ 0.07
NUP43Q8NFH3 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NUP43Q8NFH3 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
NUP43Q8NFH3 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NUP43Q8NFH3 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NUP43Q8NFH3 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NUP43Q8NFH3 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NUP43Q8NFH3 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.5■□□□□ 0.07
NUP43Q8NFH3 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NUP43Q8NFH3 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
NUP43Q8NFH3 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NUP43Q8NFH3 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NUP43Q8NFH3 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NUP43Q8NFH3 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NUP43Q8NFH3 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.5■□□□□ 0.07
NUP43Q8NFH3 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NUP43Q8NFH3 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NUP43Q8NFH3 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.5■□□□□ 0.07
NUP43Q8NFH3 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.5■□□□□ 0.07
NUP43Q8NFH3 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
NUP43Q8NFH3 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
NUP43Q8NFH3 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NUP43Q8NFH3 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.5■□□□□ 0.07
NUP43Q8NFH3 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.5■□□□□ 0.07
NUP43Q8NFH3 RHOQP3-201ENST00000437982 621 ntBASIC15.5■□□□□ 0.07
NUP43Q8NFH3 POU5F1P6-201ENST00000466990 990 ntBASIC15.5■□□□□ 0.07
NUP43Q8NFH3 RPL13AP23-201ENST00000480739 586 ntBASIC15.5■□□□□ 0.07
NUP43Q8NFH3 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NUP43Q8NFH3 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NUP43Q8NFH3 AC034105.1-201ENST00000563488 319 ntBASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms