Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
RTL9Q8NET4 AC027307.3-201ENST00000594262 1100 ntBASIC20.24■□□□□ 0.83
RTL9Q8NET4 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTL9Q8NET4 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC20.24■□□□□ 0.83
RTL9Q8NET4 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTL9Q8NET4 OR6D1P-202ENST00000641007 5290 ntBASIC20.24■□□□□ 0.83
RTL9Q8NET4 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
RTL9Q8NET4 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC20.24■□□□□ 0.83
RTL9Q8NET4 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RTL9Q8NET4 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTL9Q8NET4 BTBD7P1-201ENST00000447253 1453 ntBASIC20.24■□□□□ 0.83
RTL9Q8NET4 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTL9Q8NET4 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
RTL9Q8NET4 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC20.24■□□□□ 0.83
RTL9Q8NET4 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTL9Q8NET4 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
RTL9Q8NET4 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTL9Q8NET4 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC20.24■□□□□ 0.83
RTL9Q8NET4 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
RTL9Q8NET4 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTL9Q8NET4 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC20.24■□□□□ 0.83
RTL9Q8NET4 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC20.24■□□□□ 0.83
RTL9Q8NET4 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC20.23■□□□□ 0.83
RTL9Q8NET4 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTL9Q8NET4 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
RTL9Q8NET4 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTL9Q8NET4 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RTL9Q8NET4 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTL9Q8NET4 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC20.23■□□□□ 0.83
RTL9Q8NET4 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC20.23■□□□□ 0.83
RTL9Q8NET4 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTL9Q8NET4 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTL9Q8NET4 AL512361.1-201ENST00000554200 418 ntBASIC20.23■□□□□ 0.83
RTL9Q8NET4 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTL9Q8NET4 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTL9Q8NET4 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTL9Q8NET4 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
RTL9Q8NET4 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC20.23■□□□□ 0.83
RTL9Q8NET4 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC20.23■□□□□ 0.83
RTL9Q8NET4 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTL9Q8NET4 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC20.23■□□□□ 0.83
RTL9Q8NET4 AC105020.1-201ENST00000435356 2205 ntBASIC20.23■□□□□ 0.83
RTL9Q8NET4 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC20.23■□□□□ 0.83
RTL9Q8NET4 PCGF3-213ENST00000620529 1899 ntBASIC20.23■□□□□ 0.83
RTL9Q8NET4 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTL9Q8NET4 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RTL9Q8NET4 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTL9Q8NET4 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTL9Q8NET4 CEP83-AS1-201ENST00000623122 2482 ntBASIC20.23■□□□□ 0.83
RTL9Q8NET4 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC20.22■□□□□ 0.83
RTL9Q8NET4 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RTL9Q8NET4 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RTL9Q8NET4 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC20.22■□□□□ 0.83
RTL9Q8NET4 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RTL9Q8NET4 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC20.22■□□□□ 0.83
RTL9Q8NET4 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RTL9Q8NET4 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC20.22■□□□□ 0.83
RTL9Q8NET4 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
RTL9Q8NET4 AC026979.3-201ENST00000607315 403 ntBASIC20.22■□□□□ 0.83
RTL9Q8NET4 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC20.22■□□□□ 0.83
RTL9Q8NET4 KRT8P12-202ENST00000472924 1397 ntBASIC20.22■□□□□ 0.83
RTL9Q8NET4 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
RTL9Q8NET4 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RTL9Q8NET4 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RTL9Q8NET4 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RTL9Q8NET4 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
RTL9Q8NET4 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC20.22■□□□□ 0.83
RTL9Q8NET4 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RTL9Q8NET4 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RTL9Q8NET4 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
RTL9Q8NET4 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RTL9Q8NET4 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RTL9Q8NET4 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
RTL9Q8NET4 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RTL9Q8NET4 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RTL9Q8NET4 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC20.22■□□□□ 0.83
RTL9Q8NET4 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
RTL9Q8NET4 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC20.22■□□□□ 0.83
RTL9Q8NET4 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RTL9Q8NET4 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC20.21■□□□□ 0.83
RTL9Q8NET4 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC20.21■□□□□ 0.83
RTL9Q8NET4 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC20.21■□□□□ 0.83
RTL9Q8NET4 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RTL9Q8NET4 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RTL9Q8NET4 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RTL9Q8NET4 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RTL9Q8NET4 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RTL9Q8NET4 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC20.21■□□□□ 0.83
RTL9Q8NET4 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RTL9Q8NET4 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC20.21■□□□□ 0.83
RTL9Q8NET4 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC20.21■□□□□ 0.83
RTL9Q8NET4 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC20.21■□□□□ 0.83
RTL9Q8NET4 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC20.21■□□□□ 0.83
RTL9Q8NET4 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC20.21■□□□□ 0.83
RTL9Q8NET4 AC004233.3-201ENST00000607794 1269 ntBASIC20.21■□□□□ 0.83
RTL9Q8NET4 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
RTL9Q8NET4 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.21■□□□□ 0.83
RTL9Q8NET4 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RTL9Q8NET4 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC20.21■□□□□ 0.83
RTL9Q8NET4 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms