Protein–RNA interactions for Protein: Q8IWD4

CCDC117, Coiled-coil domain-containing protein 117, humanhuman

Predicted RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117Q8IWD4 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CCDC117Q8IWD4 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
CCDC117Q8IWD4 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CCDC117Q8IWD4 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC117Q8IWD4 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CCDC117Q8IWD4 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC117Q8IWD4 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CCDC117Q8IWD4 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.21■□□□□ 0.35
CCDC117Q8IWD4 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.21■□□□□ 0.35
CCDC117Q8IWD4 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC117Q8IWD4 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CCDC117Q8IWD4 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC117Q8IWD4 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC117Q8IWD4 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC117Q8IWD4 RNU1-129P-201ENST00000384064 167 ntBASIC17.21■□□□□ 0.35
CCDC117Q8IWD4 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.21■□□□□ 0.35
CCDC117Q8IWD4 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.21■□□□□ 0.35
CCDC117Q8IWD4 TIMM8BP1-201ENST00000452384 211 ntBASIC17.21■□□□□ 0.35
CCDC117Q8IWD4 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.21■□□□□ 0.35
CCDC117Q8IWD4 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC117Q8IWD4 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.21■□□□□ 0.35
CCDC117Q8IWD4 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.21■□□□□ 0.35
CCDC117Q8IWD4 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.21■□□□□ 0.35
CCDC117Q8IWD4 U1.21-201ENST00000580816 167 ntBASIC17.21■□□□□ 0.35
CCDC117Q8IWD4 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.21■□□□□ 0.35
CCDC117Q8IWD4 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.21■□□□□ 0.35
CCDC117Q8IWD4 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CCDC117Q8IWD4 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CCDC117Q8IWD4 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC117Q8IWD4 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.21■□□□□ 0.35
CCDC117Q8IWD4 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC117Q8IWD4 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC117Q8IWD4 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CCDC117Q8IWD4 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.21■□□□□ 0.34
CCDC117Q8IWD4 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CCDC117Q8IWD4 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CCDC117Q8IWD4 AKAP8P1-201ENST00000434743 1349 ntBASIC17.21■□□□□ 0.34
CCDC117Q8IWD4 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.21■□□□□ 0.34
CCDC117Q8IWD4 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
CCDC117Q8IWD4 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CCDC117Q8IWD4 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC117Q8IWD4 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC117Q8IWD4 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.2■□□□□ 0.34
CCDC117Q8IWD4 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC117Q8IWD4 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC117Q8IWD4 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
CCDC117Q8IWD4 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC117Q8IWD4 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.2■□□□□ 0.34
CCDC117Q8IWD4 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC117Q8IWD4 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC117Q8IWD4 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC117Q8IWD4 AL355306.1-201ENST00000415580 579 ntBASIC17.2■□□□□ 0.34
CCDC117Q8IWD4 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC117Q8IWD4 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.2■□□□□ 0.34
CCDC117Q8IWD4 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.2■□□□□ 0.34
CCDC117Q8IWD4 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.2■□□□□ 0.34
CCDC117Q8IWD4 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
CCDC117Q8IWD4 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC17.2■□□□□ 0.34
CCDC117Q8IWD4 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
CCDC117Q8IWD4 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
CCDC117Q8IWD4 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC117Q8IWD4 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC117Q8IWD4 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC117Q8IWD4 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.2■□□□□ 0.34
CCDC117Q8IWD4 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.19■□□□□ 0.34
CCDC117Q8IWD4 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC117Q8IWD4 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.19■□□□□ 0.34
CCDC117Q8IWD4 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.19■□□□□ 0.34
CCDC117Q8IWD4 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CCDC117Q8IWD4 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC117Q8IWD4 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CCDC117Q8IWD4 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CCDC117Q8IWD4 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC117Q8IWD4 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.19■□□□□ 0.34
CCDC117Q8IWD4 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.19■□□□□ 0.34
CCDC117Q8IWD4 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC117Q8IWD4 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC117Q8IWD4 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC117Q8IWD4 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.19■□□□□ 0.34
CCDC117Q8IWD4 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.19■□□□□ 0.34
CCDC117Q8IWD4 TFAMP1-201ENST00000412727 736 ntBASIC17.19■□□□□ 0.34
CCDC117Q8IWD4 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC117Q8IWD4 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.19■□□□□ 0.34
CCDC117Q8IWD4 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC117Q8IWD4 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC117Q8IWD4 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.19■□□□□ 0.34
CCDC117Q8IWD4 AC092183.1-201ENST00000469884 875 ntBASIC17.19■□□□□ 0.34
CCDC117Q8IWD4 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
CCDC117Q8IWD4 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CCDC117Q8IWD4 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC117Q8IWD4 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.19■□□□□ 0.34
CCDC117Q8IWD4 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC117Q8IWD4 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC117Q8IWD4 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
CCDC117Q8IWD4 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC117Q8IWD4 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC117Q8IWD4 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC117Q8IWD4 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
CCDC117Q8IWD4 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.19■□□□□ 0.34
CCDC117Q8IWD4 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms