Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LYSMD2Q8IV50 PRORSD1P-201ENST00000295112 541 ntBASIC14.59□□□□□ -0.07
LYSMD2Q8IV50 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC14.59□□□□□ -0.07
LYSMD2Q8IV50 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
LYSMD2Q8IV50 MDFI-202ENST00000373050 809 ntTSL 2 BASIC14.59□□□□□ -0.07
LYSMD2Q8IV50 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
LYSMD2Q8IV50 FAM201B-201ENST00000458407 597 ntBASIC14.59□□□□□ -0.07
LYSMD2Q8IV50 AC128688.1-201ENST00000487626 519 ntBASIC14.59□□□□□ -0.07
LYSMD2Q8IV50 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC14.59□□□□□ -0.07
LYSMD2Q8IV50 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC14.59□□□□□ -0.07
LYSMD2Q8IV50 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC14.59□□□□□ -0.07
LYSMD2Q8IV50 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC14.59□□□□□ -0.07
LYSMD2Q8IV50 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LYSMD2Q8IV50 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.59□□□□□ -0.07
LYSMD2Q8IV50 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.59□□□□□ -0.07
LYSMD2Q8IV50 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
LYSMD2Q8IV50 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
LYSMD2Q8IV50 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LYSMD2Q8IV50 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.59□□□□□ -0.07
LYSMD2Q8IV50 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LYSMD2Q8IV50 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.59□□□□□ -0.07
LYSMD2Q8IV50 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
LYSMD2Q8IV50 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
LYSMD2Q8IV50 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LYSMD2Q8IV50 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.59□□□□□ -0.07
LYSMD2Q8IV50 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LYSMD2Q8IV50 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LYSMD2Q8IV50 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LYSMD2Q8IV50 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LYSMD2Q8IV50 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.58□□□□□ -0.07
LYSMD2Q8IV50 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
LYSMD2Q8IV50 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LYSMD2Q8IV50 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LYSMD2Q8IV50 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LYSMD2Q8IV50 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.07
LYSMD2Q8IV50 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LYSMD2Q8IV50 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.58□□□□□ -0.07
LYSMD2Q8IV50 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LYSMD2Q8IV50 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
LYSMD2Q8IV50 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
LYSMD2Q8IV50 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.58□□□□□ -0.07
LYSMD2Q8IV50 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
LYSMD2Q8IV50 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
LYSMD2Q8IV50 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LYSMD2Q8IV50 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
LYSMD2Q8IV50 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
LYSMD2Q8IV50 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LYSMD2Q8IV50 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LYSMD2Q8IV50 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LYSMD2Q8IV50 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC14.58□□□□□ -0.08
LYSMD2Q8IV50 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.08
LYSMD2Q8IV50 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LYSMD2Q8IV50 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
LYSMD2Q8IV50 MTCL1P1-201ENST00000446207 792 ntBASIC14.58□□□□□ -0.08
LYSMD2Q8IV50 AC068472.1-201ENST00000474589 881 ntBASIC14.58□□□□□ -0.08
LYSMD2Q8IV50 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC14.58□□□□□ -0.08
LYSMD2Q8IV50 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LYSMD2Q8IV50 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC14.58□□□□□ -0.08
LYSMD2Q8IV50 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC14.58□□□□□ -0.08
LYSMD2Q8IV50 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LYSMD2Q8IV50 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LYSMD2Q8IV50 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LYSMD2Q8IV50 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.58□□□□□ -0.08
LYSMD2Q8IV50 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
LYSMD2Q8IV50 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.58□□□□□ -0.08
LYSMD2Q8IV50 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LYSMD2Q8IV50 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LYSMD2Q8IV50 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LYSMD2Q8IV50 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LYSMD2Q8IV50 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.58□□□□□ -0.08
LYSMD2Q8IV50 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.58□□□□□ -0.08
LYSMD2Q8IV50 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.57□□□□□ -0.08
LYSMD2Q8IV50 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.57□□□□□ -0.08
LYSMD2Q8IV50 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC14.57□□□□□ -0.08
LYSMD2Q8IV50 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LYSMD2Q8IV50 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LYSMD2Q8IV50 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
LYSMD2Q8IV50 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.57□□□□□ -0.08
LYSMD2Q8IV50 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
LYSMD2Q8IV50 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.57□□□□□ -0.08
LYSMD2Q8IV50 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LYSMD2Q8IV50 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.57□□□□□ -0.08
LYSMD2Q8IV50 AC010460.3-201ENST00000511359 1579 ntBASIC14.57□□□□□ -0.08
LYSMD2Q8IV50 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.57□□□□□ -0.08
LYSMD2Q8IV50 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LYSMD2Q8IV50 AL671710.1-201ENST00000610245 2349 ntBASIC14.57□□□□□ -0.08
LYSMD2Q8IV50 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LYSMD2Q8IV50 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
LYSMD2Q8IV50 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
LYSMD2Q8IV50 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LYSMD2Q8IV50 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.57□□□□□ -0.08
LYSMD2Q8IV50 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC14.57□□□□□ -0.08
LYSMD2Q8IV50 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC14.57□□□□□ -0.08
LYSMD2Q8IV50 AL158047.1-201ENST00000445918 881 ntBASIC14.57□□□□□ -0.08
LYSMD2Q8IV50 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC14.57□□□□□ -0.08
LYSMD2Q8IV50 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC14.57□□□□□ -0.08
LYSMD2Q8IV50 AC098590.1-201ENST00000468126 897 ntBASIC14.57□□□□□ -0.08
LYSMD2Q8IV50 CNP-204ENST00000472031 1019 ntTSL 2 BASIC14.57□□□□□ -0.08
LYSMD2Q8IV50 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
LYSMD2Q8IV50 RPS20-210ENST00000523936 899 ntTSL 2 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms