Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LDB1Q86U70 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LDB1Q86U70 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LDB1Q86U70 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
LDB1Q86U70 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LDB1Q86U70 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
LDB1Q86U70 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
LDB1Q86U70 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.55■□□□□ 0.24
LDB1Q86U70 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LDB1Q86U70 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LDB1Q86U70 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.55■□□□□ 0.24
LDB1Q86U70 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LDB1Q86U70 CYP2T1P-202ENST00000641596 2535 ntBASIC16.55■□□□□ 0.24
LDB1Q86U70 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
LDB1Q86U70 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.55■□□□□ 0.24
LDB1Q86U70 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LDB1Q86U70 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
LDB1Q86U70 PCGF3-213ENST00000620529 1899 ntBASIC16.55■□□□□ 0.24
LDB1Q86U70 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.55■□□□□ 0.24
LDB1Q86U70 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.55■□□□□ 0.24
LDB1Q86U70 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.55■□□□□ 0.24
LDB1Q86U70 AC096734.2-201ENST00000562054 433 ntBASIC16.55■□□□□ 0.24
LDB1Q86U70 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.55■□□□□ 0.24
LDB1Q86U70 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.55■□□□□ 0.24
LDB1Q86U70 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.55■□□□□ 0.24
LDB1Q86U70 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
LDB1Q86U70 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.55■□□□□ 0.24
LDB1Q86U70 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.55■□□□□ 0.24
LDB1Q86U70 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
LDB1Q86U70 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.55■□□□□ 0.24
LDB1Q86U70 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LDB1Q86U70 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LDB1Q86U70 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.55■□□□□ 0.24
LDB1Q86U70 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.55■□□□□ 0.24
LDB1Q86U70 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LDB1Q86U70 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
LDB1Q86U70 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.55■□□□□ 0.24
LDB1Q86U70 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LDB1Q86U70 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LDB1Q86U70 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LDB1Q86U70 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LDB1Q86U70 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.55■□□□□ 0.24
LDB1Q86U70 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LDB1Q86U70 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.55■□□□□ 0.24
LDB1Q86U70 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LDB1Q86U70 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LDB1Q86U70 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.54■□□□□ 0.24
LDB1Q86U70 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LDB1Q86U70 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.54■□□□□ 0.24
LDB1Q86U70 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LDB1Q86U70 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LDB1Q86U70 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
LDB1Q86U70 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
LDB1Q86U70 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.54■□□□□ 0.24
LDB1Q86U70 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LDB1Q86U70 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.54■□□□□ 0.24
LDB1Q86U70 AC026691.1-201ENST00000602502 2017 ntBASIC16.54■□□□□ 0.24
LDB1Q86U70 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LDB1Q86U70 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LDB1Q86U70 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.54■□□□□ 0.24
LDB1Q86U70 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
LDB1Q86U70 RNU1-129P-201ENST00000384064 167 ntBASIC16.54■□□□□ 0.24
LDB1Q86U70 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.54■□□□□ 0.24
LDB1Q86U70 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.54■□□□□ 0.24
LDB1Q86U70 RHOQP3-201ENST00000437982 621 ntBASIC16.54■□□□□ 0.24
LDB1Q86U70 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
LDB1Q86U70 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.54■□□□□ 0.24
LDB1Q86U70 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.54■□□□□ 0.24
LDB1Q86U70 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.54■□□□□ 0.24
LDB1Q86U70 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.54■□□□□ 0.24
LDB1Q86U70 U1.21-201ENST00000580816 167 ntBASIC16.54■□□□□ 0.24
LDB1Q86U70 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.54■□□□□ 0.24
LDB1Q86U70 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.54■□□□□ 0.24
LDB1Q86U70 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LDB1Q86U70 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.54■□□□□ 0.24
LDB1Q86U70 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
LDB1Q86U70 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.54■□□□□ 0.24
LDB1Q86U70 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.54■□□□□ 0.24
LDB1Q86U70 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
LDB1Q86U70 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LDB1Q86U70 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LDB1Q86U70 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LDB1Q86U70 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
LDB1Q86U70 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LDB1Q86U70 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LDB1Q86U70 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LDB1Q86U70 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LDB1Q86U70 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LDB1Q86U70 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
LDB1Q86U70 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LDB1Q86U70 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LDB1Q86U70 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LDB1Q86U70 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
LDB1Q86U70 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LDB1Q86U70 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
LDB1Q86U70 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.53■□□□□ 0.24
LDB1Q86U70 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.53■□□□□ 0.24
LDB1Q86U70 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.53■□□□□ 0.24
LDB1Q86U70 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
LDB1Q86U70 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms