Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 C20orf181-201ENST00000623918 480 ntBASIC16.66■□□□□ 0.26
LYSMD3Q7Z3D4 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.66■□□□□ 0.26
LYSMD3Q7Z3D4 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LYSMD3Q7Z3D4 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
LYSMD3Q7Z3D4 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LYSMD3Q7Z3D4 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.66■□□□□ 0.26
LYSMD3Q7Z3D4 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LYSMD3Q7Z3D4 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.65■□□□□ 0.26
LYSMD3Q7Z3D4 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LYSMD3Q7Z3D4 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LYSMD3Q7Z3D4 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
LYSMD3Q7Z3D4 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
LYSMD3Q7Z3D4 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LYSMD3Q7Z3D4 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
LYSMD3Q7Z3D4 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.65■□□□□ 0.26
LYSMD3Q7Z3D4 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LYSMD3Q7Z3D4 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
LYSMD3Q7Z3D4 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LYSMD3Q7Z3D4 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
LYSMD3Q7Z3D4 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LYSMD3Q7Z3D4 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LYSMD3Q7Z3D4 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.65■□□□□ 0.26
LYSMD3Q7Z3D4 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
LYSMD3Q7Z3D4 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
LYSMD3Q7Z3D4 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LYSMD3Q7Z3D4 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.65■□□□□ 0.26
LYSMD3Q7Z3D4 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.65■□□□□ 0.26
LYSMD3Q7Z3D4 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.65■□□□□ 0.26
LYSMD3Q7Z3D4 AC092474.2-201ENST00000424288 719 ntBASIC16.65■□□□□ 0.26
LYSMD3Q7Z3D4 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LYSMD3Q7Z3D4 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.65■□□□□ 0.26
LYSMD3Q7Z3D4 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
LYSMD3Q7Z3D4 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.65■□□□□ 0.26
LYSMD3Q7Z3D4 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.65■□□□□ 0.26
LYSMD3Q7Z3D4 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.65■□□□□ 0.26
LYSMD3Q7Z3D4 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.65■□□□□ 0.26
LYSMD3Q7Z3D4 AC092902.6-201ENST00000641783 218 ntBASIC16.65■□□□□ 0.26
LYSMD3Q7Z3D4 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LYSMD3Q7Z3D4 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LYSMD3Q7Z3D4 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.65■□□□□ 0.26
LYSMD3Q7Z3D4 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LYSMD3Q7Z3D4 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
LYSMD3Q7Z3D4 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LYSMD3Q7Z3D4 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LYSMD3Q7Z3D4 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.26
LYSMD3Q7Z3D4 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
LYSMD3Q7Z3D4 GPAA1P2-202ENST00000606848 1787 ntBASIC16.64■□□□□ 0.25
LYSMD3Q7Z3D4 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
LYSMD3Q7Z3D4 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LYSMD3Q7Z3D4 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
LYSMD3Q7Z3D4 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
LYSMD3Q7Z3D4 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.64■□□□□ 0.25
LYSMD3Q7Z3D4 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LYSMD3Q7Z3D4 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
LYSMD3Q7Z3D4 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LYSMD3Q7Z3D4 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
LYSMD3Q7Z3D4 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.64■□□□□ 0.25
LYSMD3Q7Z3D4 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.64■□□□□ 0.25
LYSMD3Q7Z3D4 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.64■□□□□ 0.25
LYSMD3Q7Z3D4 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LYSMD3Q7Z3D4 GGT3P-204ENST00000453783 1664 ntBASIC16.64■□□□□ 0.25
LYSMD3Q7Z3D4 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LYSMD3Q7Z3D4 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.64■□□□□ 0.25
LYSMD3Q7Z3D4 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LYSMD3Q7Z3D4 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
LYSMD3Q7Z3D4 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
LYSMD3Q7Z3D4 LINC02199-201ENST00000506655 2702 ntBASIC16.64■□□□□ 0.25
LYSMD3Q7Z3D4 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LYSMD3Q7Z3D4 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LYSMD3Q7Z3D4 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LYSMD3Q7Z3D4 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
LYSMD3Q7Z3D4 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LYSMD3Q7Z3D4 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
LYSMD3Q7Z3D4 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.64■□□□□ 0.25
LYSMD3Q7Z3D4 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LYSMD3Q7Z3D4 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LYSMD3Q7Z3D4 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LYSMD3Q7Z3D4 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
LYSMD3Q7Z3D4 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LYSMD3Q7Z3D4 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LYSMD3Q7Z3D4 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.63■□□□□ 0.25
LYSMD3Q7Z3D4 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LYSMD3Q7Z3D4 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LYSMD3Q7Z3D4 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LYSMD3Q7Z3D4 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
LYSMD3Q7Z3D4 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.63■□□□□ 0.25
LYSMD3Q7Z3D4 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.63■□□□□ 0.25
LYSMD3Q7Z3D4 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.63■□□□□ 0.25
LYSMD3Q7Z3D4 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LYSMD3Q7Z3D4 HTR5BP-201ENST00000430851 1154 ntBASIC16.63■□□□□ 0.25
LYSMD3Q7Z3D4 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.63■□□□□ 0.25
LYSMD3Q7Z3D4 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LYSMD3Q7Z3D4 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.63■□□□□ 0.25
LYSMD3Q7Z3D4 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.63■□□□□ 0.25
LYSMD3Q7Z3D4 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.63■□□□□ 0.25
LYSMD3Q7Z3D4 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LYSMD3Q7Z3D4 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
LYSMD3Q7Z3D4 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LYSMD3Q7Z3D4 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.63■□□□□ 0.25
LYSMD3Q7Z3D4 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms