Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF550Q7Z398 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF550Q7Z398 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF550Q7Z398 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF550Q7Z398 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
ZNF550Q7Z398 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
ZNF550Q7Z398 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
ZNF550Q7Z398 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.28■□□□□ 0.04
ZNF550Q7Z398 AL591424.1-201ENST00000442569 1213 ntBASIC15.28■□□□□ 0.04
ZNF550Q7Z398 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
ZNF550Q7Z398 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.28■□□□□ 0.04
ZNF550Q7Z398 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
ZNF550Q7Z398 AC108751.1-201ENST00000490852 363 ntBASIC15.28■□□□□ 0.04
ZNF550Q7Z398 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.28■□□□□ 0.04
ZNF550Q7Z398 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.28■□□□□ 0.04
ZNF550Q7Z398 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.28■□□□□ 0.04
ZNF550Q7Z398 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.28■□□□□ 0.04
ZNF550Q7Z398 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
ZNF550Q7Z398 GGT4P-201ENST00000623672 1708 ntBASIC15.28■□□□□ 0.04
ZNF550Q7Z398 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF550Q7Z398 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.28■□□□□ 0.04
ZNF550Q7Z398 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF550Q7Z398 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF550Q7Z398 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF550Q7Z398 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF550Q7Z398 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF550Q7Z398 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF550Q7Z398 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
ZNF550Q7Z398 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF550Q7Z398 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF550Q7Z398 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF550Q7Z398 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF550Q7Z398 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.27■□□□□ 0.04
ZNF550Q7Z398 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.27■□□□□ 0.04
ZNF550Q7Z398 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF550Q7Z398 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF550Q7Z398 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.27■□□□□ 0.04
ZNF550Q7Z398 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.27■□□□□ 0.04
ZNF550Q7Z398 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.27■□□□□ 0.04
ZNF550Q7Z398 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF550Q7Z398 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF550Q7Z398 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF550Q7Z398 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
ZNF550Q7Z398 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF550Q7Z398 GPAA1P2-202ENST00000606848 1787 ntBASIC15.27■□□□□ 0.04
ZNF550Q7Z398 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.27■□□□□ 0.04
ZNF550Q7Z398 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF550Q7Z398 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
ZNF550Q7Z398 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF550Q7Z398 LINC01144-201ENST00000626198 1710 ntBASIC15.27■□□□□ 0.04
ZNF550Q7Z398 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF550Q7Z398 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF550Q7Z398 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF550Q7Z398 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF550Q7Z398 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF550Q7Z398 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.27■□□□□ 0.04
ZNF550Q7Z398 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.27■□□□□ 0.04
ZNF550Q7Z398 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF550Q7Z398 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF550Q7Z398 FAM185BP-201ENST00000443595 716 ntBASIC15.27■□□□□ 0.04
ZNF550Q7Z398 CXCL1P1-201ENST00000502804 216 ntBASIC15.27■□□□□ 0.04
ZNF550Q7Z398 RNA5SP416-201ENST00000516838 111 ntBASIC15.27■□□□□ 0.04
ZNF550Q7Z398 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.27■□□□□ 0.04
ZNF550Q7Z398 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.27■□□□□ 0.04
ZNF550Q7Z398 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.27■□□□□ 0.04
ZNF550Q7Z398 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.27■□□□□ 0.04
ZNF550Q7Z398 MIR4751-201ENST00000578027 74 ntBASIC15.27■□□□□ 0.04
ZNF550Q7Z398 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.27■□□□□ 0.04
ZNF550Q7Z398 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
ZNF550Q7Z398 MIR4515-201ENST00000584082 81 ntBASIC15.27■□□□□ 0.04
ZNF550Q7Z398 AC020765.3-201ENST00000613051 740 ntBASIC15.27■□□□□ 0.04
ZNF550Q7Z398 AC079328.2-201ENST00000561241 3354 ntBASIC15.27■□□□□ 0.04
ZNF550Q7Z398 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ZNF550Q7Z398 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.27■□□□□ 0.03
ZNF550Q7Z398 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.27■□□□□ 0.03
ZNF550Q7Z398 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.27■□□□□ 0.03
ZNF550Q7Z398 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
ZNF550Q7Z398 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.27■□□□□ 0.03
ZNF550Q7Z398 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.03
ZNF550Q7Z398 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
ZNF550Q7Z398 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.27■□□□□ 0.03
ZNF550Q7Z398 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.27■□□□□ 0.03
ZNF550Q7Z398 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
ZNF550Q7Z398 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
ZNF550Q7Z398 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.27■□□□□ 0.03
ZNF550Q7Z398 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.03
ZNF550Q7Z398 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
ZNF550Q7Z398 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ZNF550Q7Z398 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
ZNF550Q7Z398 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
ZNF550Q7Z398 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF550Q7Z398 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF550Q7Z398 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF550Q7Z398 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.26■□□□□ 0.03
ZNF550Q7Z398 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF550Q7Z398 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF550Q7Z398 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF550Q7Z398 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.26■□□□□ 0.03
ZNF550Q7Z398 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.26■□□□□ 0.03
ZNF550Q7Z398 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms