Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
CASC4Q6P4E1 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CASC4Q6P4E1 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.96■□□□□ 0.31
CASC4Q6P4E1 LAGE3P1-201ENST00000425356 484 ntBASIC16.96■□□□□ 0.31
CASC4Q6P4E1 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CASC4Q6P4E1 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.96■□□□□ 0.31
CASC4Q6P4E1 AF238378.1-201ENST00000526806 358 ntBASIC16.96■□□□□ 0.31
CASC4Q6P4E1 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.96■□□□□ 0.31
CASC4Q6P4E1 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.96■□□□□ 0.31
CASC4Q6P4E1 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.96■□□□□ 0.31
CASC4Q6P4E1 AL805961.1-202ENST00000641562 540 ntBASIC16.96■□□□□ 0.31
CASC4Q6P4E1 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CASC4Q6P4E1 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CASC4Q6P4E1 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CASC4Q6P4E1 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CASC4Q6P4E1 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.96■□□□□ 0.31
CASC4Q6P4E1 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CASC4Q6P4E1 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CASC4Q6P4E1 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.96■□□□□ 0.31
CASC4Q6P4E1 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CASC4Q6P4E1 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
CASC4Q6P4E1 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CASC4Q6P4E1 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CASC4Q6P4E1 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CASC4Q6P4E1 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CASC4Q6P4E1 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CASC4Q6P4E1 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CASC4Q6P4E1 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.95■□□□□ 0.3
CASC4Q6P4E1 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CASC4Q6P4E1 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CASC4Q6P4E1 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CASC4Q6P4E1 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CASC4Q6P4E1 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CASC4Q6P4E1 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.95■□□□□ 0.3
CASC4Q6P4E1 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.95■□□□□ 0.3
CASC4Q6P4E1 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CASC4Q6P4E1 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CASC4Q6P4E1 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CASC4Q6P4E1 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CASC4Q6P4E1 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.95■□□□□ 0.3
CASC4Q6P4E1 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.95■□□□□ 0.3
CASC4Q6P4E1 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CASC4Q6P4E1 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CASC4Q6P4E1 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.95■□□□□ 0.3
CASC4Q6P4E1 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.95■□□□□ 0.3
CASC4Q6P4E1 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CASC4Q6P4E1 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CASC4Q6P4E1 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.95■□□□□ 0.3
CASC4Q6P4E1 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CASC4Q6P4E1 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CASC4Q6P4E1 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.95■□□□□ 0.3
CASC4Q6P4E1 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CASC4Q6P4E1 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.95■□□□□ 0.3
CASC4Q6P4E1 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CASC4Q6P4E1 AC131009.4-201ENST00000624048 1740 ntBASIC16.95■□□□□ 0.3
CASC4Q6P4E1 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.95■□□□□ 0.3
CASC4Q6P4E1 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
CASC4Q6P4E1 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CASC4Q6P4E1 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CASC4Q6P4E1 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CASC4Q6P4E1 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.94■□□□□ 0.3
CASC4Q6P4E1 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.94■□□□□ 0.3
CASC4Q6P4E1 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.94■□□□□ 0.3
CASC4Q6P4E1 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CASC4Q6P4E1 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CASC4Q6P4E1 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CASC4Q6P4E1 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CASC4Q6P4E1 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.94■□□□□ 0.3
CASC4Q6P4E1 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
CASC4Q6P4E1 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.94■□□□□ 0.3
CASC4Q6P4E1 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CASC4Q6P4E1 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CASC4Q6P4E1 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
CASC4Q6P4E1 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CASC4Q6P4E1 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CASC4Q6P4E1 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.94■□□□□ 0.3
CASC4Q6P4E1 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CASC4Q6P4E1 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CASC4Q6P4E1 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.94■□□□□ 0.3
CASC4Q6P4E1 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CASC4Q6P4E1 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.94■□□□□ 0.3
CASC4Q6P4E1 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CASC4Q6P4E1 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CASC4Q6P4E1 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.94■□□□□ 0.3
CASC4Q6P4E1 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.94■□□□□ 0.3
CASC4Q6P4E1 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.94■□□□□ 0.3
CASC4Q6P4E1 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.94■□□□□ 0.3
CASC4Q6P4E1 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.94■□□□□ 0.3
CASC4Q6P4E1 CLEC4GP1-201ENST00000596555 870 ntBASIC16.94■□□□□ 0.3
CASC4Q6P4E1 IFNL4P1-201ENST00000607083 540 ntBASIC16.94■□□□□ 0.3
CASC4Q6P4E1 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CASC4Q6P4E1 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
CASC4Q6P4E1 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.94■□□□□ 0.3
CASC4Q6P4E1 AC107918.4-202ENST00000641623 219 ntBASIC16.94■□□□□ 0.3
CASC4Q6P4E1 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CASC4Q6P4E1 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.94■□□□□ 0.3
CASC4Q6P4E1 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CASC4Q6P4E1 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CASC4Q6P4E1 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.94■□□□□ 0.3
CASC4Q6P4E1 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms