Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATP2B3Q16720 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATP2B3Q16720 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ATP2B3Q16720 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ATP2B3Q16720 AC067863.1-201ENST00000494933 530 ntBASIC20.27■□□□□ 0.84
ATP2B3Q16720 AC051619.7-201ENST00000568314 623 ntBASIC20.27■□□□□ 0.84
ATP2B3Q16720 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC20.27■□□□□ 0.84
ATP2B3Q16720 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ATP2B3Q16720 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
ATP2B3Q16720 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATP2B3Q16720 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
ATP2B3Q16720 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ATP2B3Q16720 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ATP2B3Q16720 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC20.27■□□□□ 0.84
ATP2B3Q16720 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
ATP2B3Q16720 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC20.27■□□□□ 0.83
ATP2B3Q16720 GGT4P-201ENST00000623672 1708 ntBASIC20.27■□□□□ 0.83
ATP2B3Q16720 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ATP2B3Q16720 TUBB3P1-201ENST00000405796 1332 ntBASIC20.27■□□□□ 0.83
ATP2B3Q16720 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ATP2B3Q16720 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC20.26■□□□□ 0.83
ATP2B3Q16720 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2B3Q16720 GPAA1P2-202ENST00000606848 1787 ntBASIC20.26■□□□□ 0.83
ATP2B3Q16720 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC20.26■□□□□ 0.83
ATP2B3Q16720 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2B3Q16720 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC20.26■□□□□ 0.83
ATP2B3Q16720 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2B3Q16720 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
ATP2B3Q16720 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
ATP2B3Q16720 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2B3Q16720 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2B3Q16720 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2B3Q16720 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2B3Q16720 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC20.26■□□□□ 0.83
ATP2B3Q16720 HLA-J-202ENST00000469281 1241 ntBASIC20.26■□□□□ 0.83
ATP2B3Q16720 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC20.26■□□□□ 0.83
ATP2B3Q16720 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2B3Q16720 MIR6080-201ENST00000617359 66 ntBASIC20.26■□□□□ 0.83
ATP2B3Q16720 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2B3Q16720 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC20.26■□□□□ 0.83
ATP2B3Q16720 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2B3Q16720 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC20.26■□□□□ 0.83
ATP2B3Q16720 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC20.26■□□□□ 0.83
ATP2B3Q16720 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2B3Q16720 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2B3Q16720 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2B3Q16720 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC20.26■□□□□ 0.83
ATP2B3Q16720 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2B3Q16720 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2B3Q16720 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC20.25■□□□□ 0.83
ATP2B3Q16720 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2B3Q16720 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
ATP2B3Q16720 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC20.25■□□□□ 0.83
ATP2B3Q16720 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC20.25■□□□□ 0.83
ATP2B3Q16720 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2B3Q16720 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2B3Q16720 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC20.25■□□□□ 0.83
ATP2B3Q16720 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2B3Q16720 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2B3Q16720 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2B3Q16720 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2B3Q16720 MIR770-201ENST00000390219 98 ntBASIC20.25■□□□□ 0.83
ATP2B3Q16720 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC20.25■□□□□ 0.83
ATP2B3Q16720 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC20.25■□□□□ 0.83
ATP2B3Q16720 DUX4L27-201ENST00000554796 1261 ntBASIC20.25■□□□□ 0.83
ATP2B3Q16720 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC20.25■□□□□ 0.83
ATP2B3Q16720 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC20.25■□□□□ 0.83
ATP2B3Q16720 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC20.25■□□□□ 0.83
ATP2B3Q16720 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2B3Q16720 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2B3Q16720 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2B3Q16720 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
ATP2B3Q16720 AL513477.1-201ENST00000602865 2407 ntBASIC20.25■□□□□ 0.83
ATP2B3Q16720 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2B3Q16720 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
ATP2B3Q16720 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC20.25■□□□□ 0.83
ATP2B3Q16720 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC20.25■□□□□ 0.83
ATP2B3Q16720 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2B3Q16720 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2B3Q16720 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2B3Q16720 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP2B3Q16720 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP2B3Q16720 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP2B3Q16720 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC20.24■□□□□ 0.83
ATP2B3Q16720 AC022211.2-201ENST00000585075 2527 ntBASIC20.24■□□□□ 0.83
ATP2B3Q16720 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ATP2B3Q16720 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP2B3Q16720 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP2B3Q16720 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP2B3Q16720 GCK-202ENST00000345378 2421 ntTSL 2 BASIC20.24■□□□□ 0.83
ATP2B3Q16720 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
ATP2B3Q16720 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP2B3Q16720 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC20.24■□□□□ 0.83
ATP2B3Q16720 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC20.24■□□□□ 0.83
ATP2B3Q16720 PP14571-201ENST00000404327 934 ntTSL 2 BASIC20.24■□□□□ 0.83
ATP2B3Q16720 SPDYE7P-202ENST00000420373 878 ntBASIC20.24■□□□□ 0.83
ATP2B3Q16720 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC20.24■□□□□ 0.83
ATP2B3Q16720 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC20.24■□□□□ 0.83
ATP2B3Q16720 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC20.24■□□□□ 0.83
ATP2B3Q16720 RARRES2P9-201ENST00000565168 469 ntBASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms