Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
COL16A1Q07092 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
COL16A1Q07092 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC21.83■■□□□ 1.09
COL16A1Q07092 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
COL16A1Q07092 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
COL16A1Q07092 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
COL16A1Q07092 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC21.83■■□□□ 1.09
COL16A1Q07092 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
COL16A1Q07092 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
COL16A1Q07092 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
COL16A1Q07092 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC21.83■■□□□ 1.09
COL16A1Q07092 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
COL16A1Q07092 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
COL16A1Q07092 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
COL16A1Q07092 AC006001.1-201ENST00000325130 474 ntBASIC21.83■■□□□ 1.08
COL16A1Q07092 GUK1-206ENST00000366723 845 ntTSL 5 BASIC21.83■■□□□ 1.08
COL16A1Q07092 BRF1-202ENST00000379932 884 ntTSL 5 BASIC21.83■■□□□ 1.08
COL16A1Q07092 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
COL16A1Q07092 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC21.83■■□□□ 1.08
COL16A1Q07092 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC21.83■■□□□ 1.08
COL16A1Q07092 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC21.83■■□□□ 1.08
COL16A1Q07092 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC21.83■■□□□ 1.08
COL16A1Q07092 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
COL16A1Q07092 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.83■■□□□ 1.08
COL16A1Q07092 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC21.82■■□□□ 1.08
COL16A1Q07092 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
COL16A1Q07092 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
COL16A1Q07092 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.82■■□□□ 1.08
COL16A1Q07092 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
COL16A1Q07092 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL16A1Q07092 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
COL16A1Q07092 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC21.82■■□□□ 1.08
COL16A1Q07092 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
COL16A1Q07092 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
COL16A1Q07092 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC21.82■■□□□ 1.08
COL16A1Q07092 SDHD-202ENST00000525291 790 ntTSL 3 BASIC21.82■■□□□ 1.08
COL16A1Q07092 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL16A1Q07092 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC21.82■■□□□ 1.08
COL16A1Q07092 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC21.82■■□□□ 1.08
COL16A1Q07092 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL16A1Q07092 RELA-227ENST00000615805 2236 ntTSL 5 BASIC21.82■■□□□ 1.08
COL16A1Q07092 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL16A1Q07092 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL16A1Q07092 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
COL16A1Q07092 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL16A1Q07092 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL16A1Q07092 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
COL16A1Q07092 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC21.81■■□□□ 1.08
COL16A1Q07092 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC21.81■■□□□ 1.08
COL16A1Q07092 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL16A1Q07092 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL16A1Q07092 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
COL16A1Q07092 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC21.81■■□□□ 1.08
COL16A1Q07092 TOMM22P5-201ENST00000416399 439 ntBASIC21.81■■□□□ 1.08
COL16A1Q07092 RN7SL720P-201ENST00000488178 304 ntBASIC21.81■■□□□ 1.08
COL16A1Q07092 AC245884.6-201ENST00000515672 1067 ntBASIC21.81■■□□□ 1.08
COL16A1Q07092 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC21.81■■□□□ 1.08
COL16A1Q07092 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC21.81■■□□□ 1.08
COL16A1Q07092 KLK3-207ENST00000595952 969 ntTSL 3 BASIC21.81■■□□□ 1.08
COL16A1Q07092 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC21.81■■□□□ 1.08
COL16A1Q07092 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC21.81■■□□□ 1.08
COL16A1Q07092 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL16A1Q07092 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC21.81■■□□□ 1.08
COL16A1Q07092 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC21.81■■□□□ 1.08
COL16A1Q07092 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL16A1Q07092 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL16A1Q07092 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC21.81■■□□□ 1.08
COL16A1Q07092 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL16A1Q07092 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
COL16A1Q07092 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.81■■□□□ 1.08
COL16A1Q07092 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL16A1Q07092 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
COL16A1Q07092 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
COL16A1Q07092 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
COL16A1Q07092 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
COL16A1Q07092 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC21.81■■□□□ 1.08
COL16A1Q07092 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC21.8■■□□□ 1.08
COL16A1Q07092 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
COL16A1Q07092 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC21.8■■□□□ 1.08
COL16A1Q07092 HSPB1P2-201ENST00000448722 546 ntBASIC21.8■■□□□ 1.08
COL16A1Q07092 FXR1-221ENST00000491674 365 ntTSL 2 BASIC21.8■■□□□ 1.08
COL16A1Q07092 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC21.8■■□□□ 1.08
COL16A1Q07092 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
COL16A1Q07092 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL16A1Q07092 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC21.8■■□□□ 1.08
COL16A1Q07092 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL16A1Q07092 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC21.8■■□□□ 1.08
COL16A1Q07092 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC21.8■■□□□ 1.08
COL16A1Q07092 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL16A1Q07092 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL16A1Q07092 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL16A1Q07092 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL16A1Q07092 AP000974.1-201ENST00000623909 2387 ntBASIC21.8■■□□□ 1.08
COL16A1Q07092 SDCCAG3P2-201ENST00000326105 1023 ntBASIC21.8■■□□□ 1.08
COL16A1Q07092 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL16A1Q07092 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
COL16A1Q07092 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC21.8■■□□□ 1.08
COL16A1Q07092 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC21.8■■□□□ 1.08
COL16A1Q07092 FAM197Y7-201ENST00000432892 766 ntBASIC21.8■■□□□ 1.08
COL16A1Q07092 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms