Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC18.7■□□□□ 0.58
CCNA1P78396 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCNA1P78396 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCNA1P78396 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCNA1P78396 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCNA1P78396 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCNA1P78396 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCNA1P78396 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCNA1P78396 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCNA1P78396 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCNA1P78396 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC18.7■□□□□ 0.58
CCNA1P78396 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCNA1P78396 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.7■□□□□ 0.58
CCNA1P78396 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCNA1P78396 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.7■□□□□ 0.58
CCNA1P78396 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC18.7■□□□□ 0.58
CCNA1P78396 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.7■□□□□ 0.58
CCNA1P78396 TPRX2P-201ENST00000535362 881 ntBASIC18.7■□□□□ 0.58
CCNA1P78396 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCNA1P78396 AC106886.1-201ENST00000568660 600 ntBASIC18.7■□□□□ 0.58
CCNA1P78396 AC132938.2-201ENST00000579188 680 ntBASIC18.7■□□□□ 0.58
CCNA1P78396 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC18.7■□□□□ 0.58
CCNA1P78396 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCNA1P78396 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCNA1P78396 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC18.7■□□□□ 0.58
CCNA1P78396 AL591163.1-201ENST00000641757 987 ntBASIC18.7■□□□□ 0.58
CCNA1P78396 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCNA1P78396 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCNA1P78396 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCNA1P78396 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCNA1P78396 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCNA1P78396 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CCNA1P78396 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCNA1P78396 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.69■□□□□ 0.58
CCNA1P78396 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCNA1P78396 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC18.69■□□□□ 0.58
CCNA1P78396 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC18.69■□□□□ 0.58
CCNA1P78396 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCNA1P78396 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCNA1P78396 AL512652.2-201ENST00000625156 1716 ntBASIC18.69■□□□□ 0.58
CCNA1P78396 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCNA1P78396 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCNA1P78396 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.69■□□□□ 0.58
CCNA1P78396 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.69■□□□□ 0.58
CCNA1P78396 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC18.69■□□□□ 0.58
CCNA1P78396 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC18.69■□□□□ 0.58
CCNA1P78396 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CCNA1P78396 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCNA1P78396 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCNA1P78396 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CCNA1P78396 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCNA1P78396 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC18.69■□□□□ 0.58
CCNA1P78396 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCNA1P78396 AL139010.1-201ENST00000454878 894 ntBASIC18.69■□□□□ 0.58
CCNA1P78396 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC18.69■□□□□ 0.58
CCNA1P78396 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCNA1P78396 SPDYE18-201ENST00000510091 1050 ntBASIC18.69■□□□□ 0.58
CCNA1P78396 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC18.69■□□□□ 0.58
CCNA1P78396 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18.69■□□□□ 0.58
CCNA1P78396 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCNA1P78396 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CCNA1P78396 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.69■□□□□ 0.58
CCNA1P78396 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCNA1P78396 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCNA1P78396 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCNA1P78396 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.69■□□□□ 0.58
CCNA1P78396 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCNA1P78396 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCNA1P78396 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.69■□□□□ 0.58
CCNA1P78396 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCNA1P78396 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.69■□□□□ 0.58
CCNA1P78396 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCNA1P78396 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCNA1P78396 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCNA1P78396 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCNA1P78396 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCNA1P78396 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCNA1P78396 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.68■□□□□ 0.58
CCNA1P78396 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCNA1P78396 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCNA1P78396 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CCNA1P78396 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCNA1P78396 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCNA1P78396 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC18.68■□□□□ 0.58
CCNA1P78396 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCNA1P78396 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC18.68■□□□□ 0.58
CCNA1P78396 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC18.68■□□□□ 0.58
CCNA1P78396 WASH4P-201ENST00000564273 1246 ntBASIC18.68■□□□□ 0.58
CCNA1P78396 AC099568.2-201ENST00000609194 695 ntBASIC18.68■□□□□ 0.58
CCNA1P78396 AC004790.1-201ENST00000612686 536 ntBASIC18.68■□□□□ 0.58
CCNA1P78396 AC004461.2-201ENST00000629517 803 ntBASIC18.68■□□□□ 0.58
CCNA1P78396 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCNA1P78396 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCNA1P78396 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.68■□□□□ 0.58
CCNA1P78396 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CCNA1P78396 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCNA1P78396 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCNA1P78396 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CCNA1P78396 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CCNA1P78396 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms