Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
AP3S2P59780 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.29□□□□□ -0.12
AP3S2P59780 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP3S2P59780 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP3S2P59780 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP3S2P59780 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP3S2P59780 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
AP3S2P59780 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP3S2P59780 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
AP3S2P59780 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP3S2P59780 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP3S2P59780 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP3S2P59780 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP3S2P59780 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
AP3S2P59780 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP3S2P59780 AC003669.1-201ENST00000334569 611 ntBASIC14.28□□□□□ -0.12
AP3S2P59780 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP3S2P59780 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP3S2P59780 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
AP3S2P59780 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.28□□□□□ -0.12
AP3S2P59780 POU5F1P6-201ENST00000466990 990 ntBASIC14.28□□□□□ -0.12
AP3S2P59780 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC14.28□□□□□ -0.12
AP3S2P59780 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC14.28□□□□□ -0.12
AP3S2P59780 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
AP3S2P59780 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP3S2P59780 KRT18P6-201ENST00000555540 1265 ntBASIC14.28□□□□□ -0.12
AP3S2P59780 DUX4L17-201ENST00000557360 1267 ntBASIC14.28□□□□□ -0.12
AP3S2P59780 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC14.28□□□□□ -0.12
AP3S2P59780 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP3S2P59780 KRT8P49-201ENST00000604166 1432 ntBASIC14.28□□□□□ -0.12
AP3S2P59780 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC14.28□□□□□ -0.12
AP3S2P59780 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.28□□□□□ -0.12
AP3S2P59780 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC14.28□□□□□ -0.12
AP3S2P59780 AL049637.2-201ENST00000641778 930 ntBASIC14.28□□□□□ -0.12
AP3S2P59780 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP3S2P59780 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
AP3S2P59780 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
AP3S2P59780 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
AP3S2P59780 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
AP3S2P59780 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
AP3S2P59780 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.27□□□□□ -0.12
AP3S2P59780 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
AP3S2P59780 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.12
AP3S2P59780 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
AP3S2P59780 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.27□□□□□ -0.12
AP3S2P59780 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
AP3S2P59780 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
AP3S2P59780 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
AP3S2P59780 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
AP3S2P59780 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
AP3S2P59780 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
AP3S2P59780 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
AP3S2P59780 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.27□□□□□ -0.12
AP3S2P59780 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
AP3S2P59780 FAM8A6P-201ENST00000407496 1135 ntBASIC14.27□□□□□ -0.13
AP3S2P59780 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC14.27□□□□□ -0.13
AP3S2P59780 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC14.27□□□□□ -0.13
AP3S2P59780 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
AP3S2P59780 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC14.27□□□□□ -0.13
AP3S2P59780 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC14.27□□□□□ -0.13
AP3S2P59780 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
AP3S2P59780 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC14.27□□□□□ -0.13
AP3S2P59780 LITAF-220ENST00000620789 692 ntTSL 5 BASIC14.27□□□□□ -0.13
AP3S2P59780 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
AP3S2P59780 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
AP3S2P59780 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
AP3S2P59780 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
AP3S2P59780 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
AP3S2P59780 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
AP3S2P59780 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
AP3S2P59780 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.27□□□□□ -0.13
AP3S2P59780 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.27□□□□□ -0.13
AP3S2P59780 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
AP3S2P59780 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
AP3S2P59780 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
AP3S2P59780 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
AP3S2P59780 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
AP3S2P59780 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
AP3S2P59780 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.26□□□□□ -0.13
AP3S2P59780 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.26□□□□□ -0.13
AP3S2P59780 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP3S2P59780 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
AP3S2P59780 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.26□□□□□ -0.13
AP3S2P59780 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC14.26□□□□□ -0.13
AP3S2P59780 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP3S2P59780 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
AP3S2P59780 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP3S2P59780 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP3S2P59780 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.26□□□□□ -0.13
AP3S2P59780 AL353593.2-201ENST00000602529 1483 ntBASIC14.26□□□□□ -0.13
AP3S2P59780 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.26□□□□□ -0.13
AP3S2P59780 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.26□□□□□ -0.13
AP3S2P59780 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
AP3S2P59780 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP3S2P59780 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.26□□□□□ -0.13
AP3S2P59780 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC14.26□□□□□ -0.13
AP3S2P59780 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.26□□□□□ -0.13
AP3S2P59780 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.26□□□□□ -0.13
AP3S2P59780 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
AP3S2P59780 FAM220CP-201ENST00000395253 831 ntBASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms