Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 AC010327.4-202ENST00000591484 748 ntBASIC12.33□□□□□ -0.44
CMC4P56277 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
CMC4P56277 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC12.33□□□□□ -0.44
CMC4P56277 AC008267.7-201ENST00000624570 1194 ntBASIC12.33□□□□□ -0.44
CMC4P56277 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CMC4P56277 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CMC4P56277 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CMC4P56277 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CMC4P56277 AMT-206ENST00000458307 1860 ntTSL 2 BASIC12.33□□□□□ -0.44
CMC4P56277 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC12.33□□□□□ -0.44
CMC4P56277 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
CMC4P56277 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CMC4P56277 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CMC4P56277 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CMC4P56277 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CMC4P56277 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC12.33□□□□□ -0.44
CMC4P56277 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC12.33□□□□□ -0.44
CMC4P56277 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
CMC4P56277 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
CMC4P56277 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CMC4P56277 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CMC4P56277 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
CMC4P56277 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CMC4P56277 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CMC4P56277 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CMC4P56277 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
CMC4P56277 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CMC4P56277 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CMC4P56277 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CMC4P56277 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC12.32□□□□□ -0.44
CMC4P56277 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CMC4P56277 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CMC4P56277 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CMC4P56277 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC12.32□□□□□ -0.44
CMC4P56277 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CMC4P56277 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CMC4P56277 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC12.32□□□□□ -0.44
CMC4P56277 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC12.32□□□□□ -0.44
CMC4P56277 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CMC4P56277 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CMC4P56277 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
CMC4P56277 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
CMC4P56277 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
CMC4P56277 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CMC4P56277 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CMC4P56277 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC12.32□□□□□ -0.44
CMC4P56277 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC12.32□□□□□ -0.44
CMC4P56277 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
CMC4P56277 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC12.32□□□□□ -0.44
CMC4P56277 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC12.32□□□□□ -0.44
CMC4P56277 AC105233.2-201ENST00000523697 349 ntBASIC12.32□□□□□ -0.44
CMC4P56277 AF228730.5-201ENST00000530288 346 ntBASIC12.32□□□□□ -0.44
CMC4P56277 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC12.32□□□□□ -0.44
CMC4P56277 SNHG9-202ENST00000564014 471 ntBASIC12.32□□□□□ -0.44
CMC4P56277 AC024267.1-201ENST00000582320 895 ntBASIC12.32□□□□□ -0.44
CMC4P56277 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CMC4P56277 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC12.32□□□□□ -0.44
CMC4P56277 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CMC4P56277 AC004835.2-201ENST00000603762 682 ntBASIC12.32□□□□□ -0.44
CMC4P56277 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC12.32□□□□□ -0.44
CMC4P56277 AC023511.2-201ENST00000618803 211 ntBASIC12.32□□□□□ -0.44
CMC4P56277 AC055717.3-201ENST00000622967 595 ntBASIC12.32□□□□□ -0.44
CMC4P56277 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC12.32□□□□□ -0.44
CMC4P56277 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CMC4P56277 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CMC4P56277 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CMC4P56277 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
CMC4P56277 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CMC4P56277 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CMC4P56277 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC12.32□□□□□ -0.44
CMC4P56277 SNX33P1-201ENST00000592116 1762 ntBASIC12.32□□□□□ -0.44
CMC4P56277 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CMC4P56277 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CMC4P56277 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC12.32□□□□□ -0.44
CMC4P56277 EML3-212ENST00000494176 2901 ntTSL 2 BASIC12.32□□□□□ -0.44
CMC4P56277 EML3-216ENST00000529309 2909 ntTSL 2 BASIC12.32□□□□□ -0.44
CMC4P56277 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CMC4P56277 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC12.32□□□□□ -0.44
CMC4P56277 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CMC4P56277 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CMC4P56277 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
CMC4P56277 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CMC4P56277 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CMC4P56277 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CMC4P56277 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC12.32□□□□□ -0.44
CMC4P56277 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC12.32□□□□□ -0.44
CMC4P56277 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CMC4P56277 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CMC4P56277 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC12.32□□□□□ -0.44
CMC4P56277 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CMC4P56277 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CMC4P56277 PCGF3-213ENST00000620529 1899 ntBASIC12.31□□□□□ -0.44
CMC4P56277 U82695.1-201ENST00000635752 1889 ntBASIC12.31□□□□□ -0.44
CMC4P56277 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC12.31□□□□□ -0.44
CMC4P56277 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CMC4P56277 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CMC4P56277 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CMC4P56277 AL512652.2-201ENST00000625156 1716 ntBASIC12.31□□□□□ -0.44
CMC4P56277 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CMC4P56277 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms