Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NR1H2P55055 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.79■□□□□ 0.12
NR1H2P55055 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
NR1H2P55055 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.79■□□□□ 0.12
NR1H2P55055 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NR1H2P55055 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.79■□□□□ 0.12
NR1H2P55055 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.79■□□□□ 0.12
NR1H2P55055 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NR1H2P55055 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NR1H2P55055 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
NR1H2P55055 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
NR1H2P55055 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
NR1H2P55055 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NR1H2P55055 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.79■□□□□ 0.12
NR1H2P55055 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
NR1H2P55055 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NR1H2P55055 AP002414.2-201ENST00000591780 3365 ntBASIC15.79■□□□□ 0.12
NR1H2P55055 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NR1H2P55055 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.79■□□□□ 0.12
NR1H2P55055 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
NR1H2P55055 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NR1H2P55055 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NR1H2P55055 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NR1H2P55055 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
NR1H2P55055 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NR1H2P55055 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NR1H2P55055 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.78■□□□□ 0.12
NR1H2P55055 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
NR1H2P55055 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.78■□□□□ 0.12
NR1H2P55055 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
NR1H2P55055 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
NR1H2P55055 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NR1H2P55055 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.78■□□□□ 0.12
NR1H2P55055 KRT16P4-201ENST00000453883 522 ntBASIC15.78■□□□□ 0.12
NR1H2P55055 MINOS1P3-201ENST00000457048 203 ntBASIC15.78■□□□□ 0.12
NR1H2P55055 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.78■□□□□ 0.12
NR1H2P55055 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.78■□□□□ 0.12
NR1H2P55055 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NR1H2P55055 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.78■□□□□ 0.12
NR1H2P55055 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.78■□□□□ 0.12
NR1H2P55055 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
NR1H2P55055 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.78■□□□□ 0.12
NR1H2P55055 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
NR1H2P55055 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.78■□□□□ 0.12
NR1H2P55055 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NR1H2P55055 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NR1H2P55055 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
NR1H2P55055 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NR1H2P55055 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NR1H2P55055 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
NR1H2P55055 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
NR1H2P55055 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NR1H2P55055 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
NR1H2P55055 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
NR1H2P55055 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.78■□□□□ 0.12
NR1H2P55055 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
NR1H2P55055 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
NR1H2P55055 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
NR1H2P55055 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.78■□□□□ 0.12
NR1H2P55055 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NR1H2P55055 BX276092.7-203ENST00000637198 1536 ntBASIC15.78■□□□□ 0.12
NR1H2P55055 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
NR1H2P55055 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.78■□□□□ 0.12
NR1H2P55055 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NR1H2P55055 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
NR1H2P55055 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
NR1H2P55055 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.77■□□□□ 0.12
NR1H2P55055 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
NR1H2P55055 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.77■□□□□ 0.12
NR1H2P55055 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.77■□□□□ 0.12
NR1H2P55055 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.77■□□□□ 0.12
NR1H2P55055 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NR1H2P55055 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NR1H2P55055 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
NR1H2P55055 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.77■□□□□ 0.12
NR1H2P55055 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.77■□□□□ 0.12
NR1H2P55055 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.77■□□□□ 0.12
NR1H2P55055 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.77■□□□□ 0.12
NR1H2P55055 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.77■□□□□ 0.12
NR1H2P55055 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NR1H2P55055 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NR1H2P55055 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
NR1H2P55055 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.77■□□□□ 0.12
NR1H2P55055 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NR1H2P55055 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NR1H2P55055 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NR1H2P55055 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NR1H2P55055 IGHV3-47-201ENST00000425060 335 ntBASIC15.77■□□□□ 0.12
NR1H2P55055 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.77■□□□□ 0.12
NR1H2P55055 EMBP1-201ENST00000458200 901 ntBASIC15.77■□□□□ 0.12
NR1H2P55055 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.77■□□□□ 0.12
NR1H2P55055 AC009078.2-202ENST00000463353 338 ntBASIC15.77■□□□□ 0.12
NR1H2P55055 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NR1H2P55055 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.77■□□□□ 0.12
NR1H2P55055 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.77■□□□□ 0.12
NR1H2P55055 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.77■□□□□ 0.12
NR1H2P55055 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NR1H2P55055 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NR1H2P55055 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
NR1H2P55055 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms