Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
EPHA4P54764 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
EPHA4P54764 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
EPHA4P54764 AL645728.1-201ENST00000366221 2101 ntBASIC15.92■□□□□ 0.14
EPHA4P54764 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.92■□□□□ 0.14
EPHA4P54764 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.92■□□□□ 0.14
EPHA4P54764 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.92■□□□□ 0.14
EPHA4P54764 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.92■□□□□ 0.14
EPHA4P54764 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
EPHA4P54764 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
EPHA4P54764 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
EPHA4P54764 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC15.92■□□□□ 0.14
EPHA4P54764 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.92■□□□□ 0.14
EPHA4P54764 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
EPHA4P54764 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
EPHA4P54764 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
EPHA4P54764 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
EPHA4P54764 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
EPHA4P54764 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
EPHA4P54764 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
EPHA4P54764 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.91■□□□□ 0.14
EPHA4P54764 FO538757.1-201ENST00000623083 1397 ntBASIC15.91■□□□□ 0.14
EPHA4P54764 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
EPHA4P54764 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
EPHA4P54764 AC060834.1-201ENST00000443027 2032 ntBASIC15.91■□□□□ 0.14
EPHA4P54764 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.91■□□□□ 0.14
EPHA4P54764 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
EPHA4P54764 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
EPHA4P54764 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
EPHA4P54764 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.91■□□□□ 0.14
EPHA4P54764 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.91■□□□□ 0.14
EPHA4P54764 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.91■□□□□ 0.14
EPHA4P54764 AL353705.2-201ENST00000428243 662 ntBASIC15.91■□□□□ 0.14
EPHA4P54764 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.91■□□□□ 0.14
EPHA4P54764 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.91■□□□□ 0.14
EPHA4P54764 INGX-202ENST00000489074 768 ntBASIC15.91■□□□□ 0.14
EPHA4P54764 IGHV3-42-201ENST00000520410 361 ntBASIC15.91■□□□□ 0.14
EPHA4P54764 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.91■□□□□ 0.14
EPHA4P54764 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.91■□□□□ 0.14
EPHA4P54764 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.91■□□□□ 0.14
EPHA4P54764 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC15.91■□□□□ 0.14
EPHA4P54764 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.91■□□□□ 0.14
EPHA4P54764 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.91■□□□□ 0.14
EPHA4P54764 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
EPHA4P54764 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
EPHA4P54764 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.91■□□□□ 0.14
EPHA4P54764 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.91■□□□□ 0.14
EPHA4P54764 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
EPHA4P54764 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.91■□□□□ 0.14
EPHA4P54764 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
EPHA4P54764 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.91■□□□□ 0.14
EPHA4P54764 AL512652.2-201ENST00000625156 1716 ntBASIC15.91■□□□□ 0.14
EPHA4P54764 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.91■□□□□ 0.14
EPHA4P54764 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.91■□□□□ 0.14
EPHA4P54764 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
EPHA4P54764 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.91■□□□□ 0.14
EPHA4P54764 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.91■□□□□ 0.14
EPHA4P54764 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
EPHA4P54764 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
EPHA4P54764 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
EPHA4P54764 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
EPHA4P54764 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
EPHA4P54764 AL035456.1-201ENST00000456064 1369 ntBASIC15.9■□□□□ 0.14
EPHA4P54764 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
EPHA4P54764 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
EPHA4P54764 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.9■□□□□ 0.14
EPHA4P54764 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
EPHA4P54764 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
EPHA4P54764 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
EPHA4P54764 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
EPHA4P54764 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
EPHA4P54764 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
EPHA4P54764 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
EPHA4P54764 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
EPHA4P54764 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.9■□□□□ 0.14
EPHA4P54764 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
EPHA4P54764 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
EPHA4P54764 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.9■□□□□ 0.14
EPHA4P54764 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.9■□□□□ 0.14
EPHA4P54764 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.9■□□□□ 0.14
EPHA4P54764 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.9■□□□□ 0.14
EPHA4P54764 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
EPHA4P54764 AC080080.1-201ENST00000625121 2420 ntBASIC15.9■□□□□ 0.14
EPHA4P54764 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
EPHA4P54764 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
EPHA4P54764 AC011270.2-201ENST00000624293 2550 ntBASIC15.9■□□□□ 0.14
EPHA4P54764 AC046158.3-201ENST00000624947 2558 ntBASIC15.9■□□□□ 0.14
EPHA4P54764 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
EPHA4P54764 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.9■□□□□ 0.14
EPHA4P54764 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
EPHA4P54764 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
EPHA4P54764 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
EPHA4P54764 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
EPHA4P54764 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
EPHA4P54764 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
EPHA4P54764 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.9■□□□□ 0.14
EPHA4P54764 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
EPHA4P54764 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.9■□□□□ 0.14
EPHA4P54764 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
EPHA4P54764 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms