Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
CDC34P49427 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
CDC34P49427 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.16□□□□□ -0.3
CDC34P49427 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CDC34P49427 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDC34P49427 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDC34P49427 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
CDC34P49427 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CDC34P49427 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
CDC34P49427 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDC34P49427 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDC34P49427 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDC34P49427 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC13.15□□□□□ -0.3
CDC34P49427 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDC34P49427 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CDC34P49427 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDC34P49427 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDC34P49427 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC13.15□□□□□ -0.3
CDC34P49427 AC125634.1-201ENST00000438758 1403 ntBASIC13.15□□□□□ -0.3
CDC34P49427 HARS-203ENST00000431330 1774 ntTSL 2 BASIC13.15□□□□□ -0.3
CDC34P49427 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CDC34P49427 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC13.15□□□□□ -0.3
CDC34P49427 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC13.15□□□□□ -0.3
CDC34P49427 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDC34P49427 AC013268.4-201ENST00000637413 2228 ntBASIC13.15□□□□□ -0.3
CDC34P49427 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CDC34P49427 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CDC34P49427 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDC34P49427 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDC34P49427 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDC34P49427 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDC34P49427 MIR662-201ENST00000384847 95 ntBASIC13.15□□□□□ -0.3
CDC34P49427 MIR718-201ENST00000390190 70 ntBASIC13.15□□□□□ -0.3
CDC34P49427 SPDYE15P-201ENST00000424157 909 ntBASIC13.15□□□□□ -0.3
CDC34P49427 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC13.15□□□□□ -0.3
CDC34P49427 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC13.15□□□□□ -0.3
CDC34P49427 GCSHP5-201ENST00000443090 522 ntBASIC13.15□□□□□ -0.3
CDC34P49427 AC098590.1-201ENST00000468126 897 ntBASIC13.15□□□□□ -0.3
CDC34P49427 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDC34P49427 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CDC34P49427 AL355075.4-201ENST00000554988 638 ntBASIC13.15□□□□□ -0.3
CDC34P49427 AC005332.3-201ENST00000589904 676 ntBASIC13.15□□□□□ -0.3
CDC34P49427 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC13.15□□□□□ -0.3
CDC34P49427 AC013467.2-201ENST00000605472 835 ntBASIC13.15□□□□□ -0.3
CDC34P49427 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC13.15□□□□□ -0.3
CDC34P49427 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CDC34P49427 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC13.15□□□□□ -0.3
CDC34P49427 PRAL-201ENST00000624952 3286 ntBASIC13.15□□□□□ -0.3
CDC34P49427 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CDC34P49427 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDC34P49427 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC13.15□□□□□ -0.3
CDC34P49427 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDC34P49427 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC13.15□□□□□ -0.31
CDC34P49427 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
CDC34P49427 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
CDC34P49427 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.14□□□□□ -0.31
CDC34P49427 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.14□□□□□ -0.31
CDC34P49427 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CDC34P49427 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CDC34P49427 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CDC34P49427 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CDC34P49427 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDC34P49427 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CDC34P49427 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CDC34P49427 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC13.14□□□□□ -0.31
CDC34P49427 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CDC34P49427 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDC34P49427 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDC34P49427 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.14□□□□□ -0.31
CDC34P49427 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC13.14□□□□□ -0.31
CDC34P49427 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CDC34P49427 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC13.14□□□□□ -0.31
CDC34P49427 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC13.14□□□□□ -0.31
CDC34P49427 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC13.14□□□□□ -0.31
CDC34P49427 AL390719.2-201ENST00000606993 987 ntBASIC13.14□□□□□ -0.31
CDC34P49427 SNX21-213ENST00000614929 587 ntTSL 5 BASIC13.14□□□□□ -0.31
CDC34P49427 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.14□□□□□ -0.31
CDC34P49427 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CDC34P49427 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDC34P49427 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDC34P49427 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDC34P49427 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC13.14□□□□□ -0.31
CDC34P49427 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDC34P49427 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDC34P49427 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.14□□□□□ -0.31
CDC34P49427 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC13.14□□□□□ -0.31
CDC34P49427 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDC34P49427 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDC34P49427 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
CDC34P49427 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC13.14□□□□□ -0.31
CDC34P49427 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDC34P49427 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDC34P49427 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
CDC34P49427 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC13.14□□□□□ -0.31
CDC34P49427 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CDC34P49427 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDC34P49427 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CDC34P49427 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
CDC34P49427 KRT8P49-201ENST00000604166 1432 ntBASIC13.13□□□□□ -0.31
CDC34P49427 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms