Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TM4SF4P48230 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC18.57■□□□□ 0.56
TM4SF4P48230 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC18.57■□□□□ 0.56
TM4SF4P48230 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TM4SF4P48230 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TM4SF4P48230 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
TM4SF4P48230 INTS4P2-202ENST00000614726 2019 ntBASIC18.57■□□□□ 0.56
TM4SF4P48230 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TM4SF4P48230 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC18.57■□□□□ 0.56
TM4SF4P48230 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TM4SF4P48230 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TM4SF4P48230 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
TM4SF4P48230 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.56■□□□□ 0.56
TM4SF4P48230 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.56■□□□□ 0.56
TM4SF4P48230 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.56■□□□□ 0.56
TM4SF4P48230 GPAA1P2-202ENST00000606848 1787 ntBASIC18.56■□□□□ 0.56
TM4SF4P48230 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.56■□□□□ 0.56
TM4SF4P48230 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.56■□□□□ 0.56
TM4SF4P48230 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC18.56■□□□□ 0.56
TM4SF4P48230 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC18.56■□□□□ 0.56
TM4SF4P48230 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC18.56■□□□□ 0.56
TM4SF4P48230 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC18.56■□□□□ 0.56
TM4SF4P48230 OARD1-212ENST00000482515 832 ntTSL 2 BASIC18.56■□□□□ 0.56
TM4SF4P48230 RPL13AP25-201ENST00000484130 612 ntBASIC18.56■□□□□ 0.56
TM4SF4P48230 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC18.56■□□□□ 0.56
TM4SF4P48230 NEU3-202ENST00000526068 431 ntTSL 2 BASIC18.56■□□□□ 0.56
TM4SF4P48230 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC18.56■□□□□ 0.56
TM4SF4P48230 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TM4SF4P48230 AL049840.4-201ENST00000602422 811 ntBASIC18.56■□□□□ 0.56
TM4SF4P48230 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC18.56■□□□□ 0.56
TM4SF4P48230 AC244452.3-201ENST00000636814 210 ntBASIC18.56■□□□□ 0.56
TM4SF4P48230 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
TM4SF4P48230 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TM4SF4P48230 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
TM4SF4P48230 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TM4SF4P48230 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TM4SF4P48230 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
TM4SF4P48230 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TM4SF4P48230 TNXA-203ENST00000507684 2038 ntBASIC18.56■□□□□ 0.56
TM4SF4P48230 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TM4SF4P48230 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
TM4SF4P48230 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.55■□□□□ 0.56
TM4SF4P48230 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TM4SF4P48230 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
TM4SF4P48230 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TM4SF4P48230 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TM4SF4P48230 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TM4SF4P48230 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TM4SF4P48230 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
TM4SF4P48230 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.55■□□□□ 0.56
TM4SF4P48230 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TM4SF4P48230 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC18.55■□□□□ 0.56
TM4SF4P48230 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TM4SF4P48230 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TM4SF4P48230 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC18.55■□□□□ 0.56
TM4SF4P48230 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC18.55■□□□□ 0.56
TM4SF4P48230 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC18.55■□□□□ 0.56
TM4SF4P48230 AC104306.2-201ENST00000451877 341 ntBASIC18.55■□□□□ 0.56
TM4SF4P48230 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC18.55■□□□□ 0.56
TM4SF4P48230 AC093433.1-201ENST00000458048 571 ntBASIC18.55■□□□□ 0.56
TM4SF4P48230 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC18.55■□□□□ 0.56
TM4SF4P48230 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC18.55■□□□□ 0.56
TM4SF4P48230 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
TM4SF4P48230 MIR4321-201ENST00000592276 80 ntBASIC18.55■□□□□ 0.56
TM4SF4P48230 SNX1-214ENST00000625244 324 ntTSL 5 BASIC18.55■□□□□ 0.56
TM4SF4P48230 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TM4SF4P48230 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
TM4SF4P48230 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TM4SF4P48230 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TM4SF4P48230 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TM4SF4P48230 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TM4SF4P48230 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TM4SF4P48230 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.55■□□□□ 0.56
TM4SF4P48230 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.55■□□□□ 0.56
TM4SF4P48230 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TM4SF4P48230 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TM4SF4P48230 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TM4SF4P48230 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.54■□□□□ 0.56
TM4SF4P48230 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TM4SF4P48230 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
TM4SF4P48230 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TM4SF4P48230 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TM4SF4P48230 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
TM4SF4P48230 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.54■□□□□ 0.56
TM4SF4P48230 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TM4SF4P48230 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TM4SF4P48230 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
TM4SF4P48230 CNN2P8-201ENST00000421872 913 ntBASIC18.54■□□□□ 0.56
TM4SF4P48230 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TM4SF4P48230 OLR1-203ENST00000432556 950 ntTSL 2 BASIC18.54■□□□□ 0.56
TM4SF4P48230 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TM4SF4P48230 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
TM4SF4P48230 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TM4SF4P48230 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC18.54■□□□□ 0.56
TM4SF4P48230 AC023310.1-201ENST00000554836 735 ntBASIC18.54■□□□□ 0.56
TM4SF4P48230 AP001063.1-201ENST00000568332 529 ntBASIC18.54■□□□□ 0.56
TM4SF4P48230 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC18.54■□□□□ 0.56
TM4SF4P48230 NAT9-224ENST00000583757 583 ntTSL 3 BASIC18.54■□□□□ 0.56
TM4SF4P48230 SPIB-207ENST00000597855 564 ntTSL 4 BASIC18.54■□□□□ 0.56
TM4SF4P48230 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms