Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 AC010654.1-201ENST00000615722 808 ntBASIC17.26■□□□□ 0.35
MMP13P45452 REXO1L3P-201ENST00000622202 1288 ntBASIC17.26■□□□□ 0.35
MMP13P45452 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.26■□□□□ 0.35
MMP13P45452 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.26■□□□□ 0.35
MMP13P45452 AC006538.1-201ENST00000567905 1585 ntBASIC17.26■□□□□ 0.35
MMP13P45452 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
MMP13P45452 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.26■□□□□ 0.35
MMP13P45452 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.26■□□□□ 0.35
MMP13P45452 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MMP13P45452 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MMP13P45452 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.26■□□□□ 0.35
MMP13P45452 TOP3BP1-201ENST00000420768 1380 ntBASIC17.26■□□□□ 0.35
MMP13P45452 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MMP13P45452 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.26■□□□□ 0.35
MMP13P45452 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MMP13P45452 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MMP13P45452 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MMP13P45452 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.26■□□□□ 0.35
MMP13P45452 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
MMP13P45452 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MMP13P45452 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
MMP13P45452 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
MMP13P45452 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
MMP13P45452 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MMP13P45452 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MMP13P45452 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
MMP13P45452 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
MMP13P45452 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MMP13P45452 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.25■□□□□ 0.35
MMP13P45452 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MMP13P45452 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
MMP13P45452 PRSS29P-201ENST00000440800 595 ntBASIC17.25■□□□□ 0.35
MMP13P45452 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
MMP13P45452 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.25■□□□□ 0.35
MMP13P45452 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.25■□□□□ 0.35
MMP13P45452 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
MMP13P45452 AC120114.3-201ENST00000611923 658 ntBASIC17.25■□□□□ 0.35
MMP13P45452 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.25■□□□□ 0.35
MMP13P45452 BX640515.1-201ENST00000617215 977 ntBASIC17.25■□□□□ 0.35
MMP13P45452 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MMP13P45452 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MMP13P45452 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
MMP13P45452 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
MMP13P45452 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MMP13P45452 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MMP13P45452 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.25■□□□□ 0.35
MMP13P45452 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.25■□□□□ 0.35
MMP13P45452 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MMP13P45452 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MMP13P45452 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MMP13P45452 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MMP13P45452 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.25■□□□□ 0.35
MMP13P45452 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MMP13P45452 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MMP13P45452 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
MMP13P45452 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MMP13P45452 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
MMP13P45452 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
MMP13P45452 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MMP13P45452 AC129492.6-201ENST00000611383 1305 ntBASIC17.24■□□□□ 0.35
MMP13P45452 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
MMP13P45452 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
MMP13P45452 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MMP13P45452 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
MMP13P45452 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
MMP13P45452 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
MMP13P45452 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MMP13P45452 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
MMP13P45452 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
MMP13P45452 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
MMP13P45452 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
MMP13P45452 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
MMP13P45452 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.24■□□□□ 0.35
MMP13P45452 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.24■□□□□ 0.35
MMP13P45452 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.24■□□□□ 0.35
MMP13P45452 RPL13AP23-201ENST00000480739 586 ntBASIC17.24■□□□□ 0.35
MMP13P45452 AC107918.2-201ENST00000530817 355 ntBASIC17.24■□□□□ 0.35
MMP13P45452 AC145285.3-201ENST00000564603 959 ntBASIC17.24■□□□□ 0.35
MMP13P45452 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.24■□□□□ 0.35
MMP13P45452 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.24■□□□□ 0.35
MMP13P45452 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MMP13P45452 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
MMP13P45452 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
MMP13P45452 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.24■□□□□ 0.35
MMP13P45452 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
MMP13P45452 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MMP13P45452 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
MMP13P45452 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
MMP13P45452 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
MMP13P45452 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
MMP13P45452 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
MMP13P45452 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.23■□□□□ 0.35
MMP13P45452 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MMP13P45452 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.23■□□□□ 0.35
MMP13P45452 AC068418.2-201ENST00000577309 3703 ntBASIC17.23■□□□□ 0.35
MMP13P45452 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
MMP13P45452 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MMP13P45452 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
MMP13P45452 AC104109.2-201ENST00000602919 1418 ntBASIC17.23■□□□□ 0.35
MMP13P45452 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms