Protein–RNA interactions for Protein: P42695

NCAPD3, Condensin-2 complex subunit D3, humanhuman

Predictions only

Length 1,498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3P42695 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC28.6■■■□□ 2.17
NCAPD3P42695 AC253536.4-201ENST00000440539 267 ntBASIC28.6■■■□□ 2.17
NCAPD3P42695 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
NCAPD3P42695 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC28.6■■■□□ 2.17
NCAPD3P42695 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC28.6■■■□□ 2.17
NCAPD3P42695 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC28.6■■■□□ 2.17
NCAPD3P42695 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC28.6■■■□□ 2.17
NCAPD3P42695 U82695.1-201ENST00000635752 1889 ntBASIC28.6■■■□□ 2.17
NCAPD3P42695 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC28.6■■■□□ 2.17
NCAPD3P42695 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
NCAPD3P42695 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC28.6■■■□□ 2.17
NCAPD3P42695 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
NCAPD3P42695 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC28.6■■■□□ 2.17
NCAPD3P42695 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
NCAPD3P42695 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
NCAPD3P42695 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
NCAPD3P42695 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC28.6■■■□□ 2.17
NCAPD3P42695 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
NCAPD3P42695 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
NCAPD3P42695 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC28.6■■■□□ 2.17
NCAPD3P42695 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC28.59■■■□□ 2.17
NCAPD3P42695 MPRIPP1-201ENST00000452433 1089 ntBASIC28.59■■■□□ 2.17
NCAPD3P42695 EIF4HP1-201ENST00000453115 687 ntBASIC28.59■■■□□ 2.17
NCAPD3P42695 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC28.59■■■□□ 2.17
NCAPD3P42695 FADS2-212ENST00000522639 360 ntTSL 5 BASIC28.59■■■□□ 2.17
NCAPD3P42695 FADS2-215ENST00000574708 385 ntTSL 3 BASIC28.59■■■□□ 2.17
NCAPD3P42695 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
NCAPD3P42695 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC28.59■■■□□ 2.17
NCAPD3P42695 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
NCAPD3P42695 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC28.59■■■□□ 2.17
NCAPD3P42695 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
NCAPD3P42695 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
NCAPD3P42695 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
NCAPD3P42695 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
NCAPD3P42695 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
NCAPD3P42695 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
NCAPD3P42695 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
NCAPD3P42695 UPF3AP2-201ENST00000457924 1132 ntBASIC28.59■■■□□ 2.17
NCAPD3P42695 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC28.59■■■□□ 2.17
NCAPD3P42695 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC28.59■■■□□ 2.17
NCAPD3P42695 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC28.58■■■□□ 2.17
NCAPD3P42695 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
NCAPD3P42695 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
NCAPD3P42695 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC28.58■■■□□ 2.17
NCAPD3P42695 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
NCAPD3P42695 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC28.58■■■□□ 2.17
NCAPD3P42695 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
NCAPD3P42695 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC28.58■■■□□ 2.17
NCAPD3P42695 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC28.58■■■□□ 2.17
NCAPD3P42695 AL662890.1-201ENST00000396818 632 ntBASIC28.58■■■□□ 2.17
NCAPD3P42695 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
NCAPD3P42695 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC28.58■■■□□ 2.17
NCAPD3P42695 KRT18P64-201ENST00000434946 1219 ntBASIC28.58■■■□□ 2.17
NCAPD3P42695 AC023310.1-201ENST00000554836 735 ntBASIC28.58■■■□□ 2.17
NCAPD3P42695 AC000095.1-201ENST00000603208 874 ntBASIC28.58■■■□□ 2.17
NCAPD3P42695 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
NCAPD3P42695 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
NCAPD3P42695 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
NCAPD3P42695 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
NCAPD3P42695 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC28.57■■■□□ 2.16
NCAPD3P42695 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC28.57■■■□□ 2.16
NCAPD3P42695 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
NCAPD3P42695 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC28.57■■■□□ 2.16
NCAPD3P42695 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC28.57■■■□□ 2.16
NCAPD3P42695 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
NCAPD3P42695 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
NCAPD3P42695 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
NCAPD3P42695 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC28.57■■■□□ 2.16
NCAPD3P42695 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC28.57■■■□□ 2.16
NCAPD3P42695 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC28.57■■■□□ 2.16
NCAPD3P42695 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC28.57■■■□□ 2.16
NCAPD3P42695 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC28.57■■■□□ 2.16
NCAPD3P42695 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC28.57■■■□□ 2.16
NCAPD3P42695 AC138627.1-207ENST00000641560 1006 ntBASIC28.57■■■□□ 2.16
NCAPD3P42695 RERG-209ENST00000546331 1383 ntTSL 2 BASIC28.57■■■□□ 2.16
NCAPD3P42695 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC28.57■■■□□ 2.16
NCAPD3P42695 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC28.57■■■□□ 2.16
NCAPD3P42695 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC28.57■■■□□ 2.16
NCAPD3P42695 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC28.56■■■□□ 2.16
NCAPD3P42695 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC28.56■■■□□ 2.16
NCAPD3P42695 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
NCAPD3P42695 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC28.56■■■□□ 2.16
NCAPD3P42695 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC28.56■■■□□ 2.16
NCAPD3P42695 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
NCAPD3P42695 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
NCAPD3P42695 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC28.56■■■□□ 2.16
NCAPD3P42695 AC005077.2-201ENST00000449786 690 ntBASIC28.56■■■□□ 2.16
NCAPD3P42695 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC28.56■■■□□ 2.16
NCAPD3P42695 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
NCAPD3P42695 RERG-205ENST00000537647 935 ntTSL 2 BASIC28.56■■■□□ 2.16
NCAPD3P42695 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC28.56■■■□□ 2.16
NCAPD3P42695 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC28.56■■■□□ 2.16
NCAPD3P42695 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC28.56■■■□□ 2.16
NCAPD3P42695 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC28.56■■■□□ 2.16
NCAPD3P42695 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
NCAPD3P42695 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC28.55■■■□□ 2.16
NCAPD3P42695 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC28.55■■■□□ 2.16
NCAPD3P42695 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC28.55■■■□□ 2.16
NCAPD3P42695 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC28.55■■■□□ 2.16
NCAPD3P42695 TEX30-203ENST00000376022 828 ntTSL 2 BASIC28.55■■■□□ 2.16
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms