Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PDE6BP35913 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.2■□□□□ 0.82
PDE6BP35913 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDE6BP35913 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PDE6BP35913 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
PDE6BP35913 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PDE6BP35913 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDE6BP35913 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC20.2■□□□□ 0.82
PDE6BP35913 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
PDE6BP35913 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDE6BP35913 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC20.2■□□□□ 0.82
PDE6BP35913 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PDE6BP35913 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PDE6BP35913 BNIP3P42-201ENST00000454982 569 ntBASIC20.2■□□□□ 0.82
PDE6BP35913 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC20.2■□□□□ 0.82
PDE6BP35913 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC20.2■□□□□ 0.82
PDE6BP35913 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PDE6BP35913 AC010319.3-201ENST00000597028 470 ntBASIC20.2■□□□□ 0.82
PDE6BP35913 BNIP3P29-201ENST00000598302 571 ntBASIC20.2■□□□□ 0.82
PDE6BP35913 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
PDE6BP35913 AC011447.5-201ENST00000616168 564 ntBASIC20.2■□□□□ 0.82
PDE6BP35913 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.2■□□□□ 0.82
PDE6BP35913 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.2■□□□□ 0.82
PDE6BP35913 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PDE6BP35913 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDE6BP35913 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PDE6BP35913 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC20.2■□□□□ 0.82
PDE6BP35913 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC20.2■□□□□ 0.82
PDE6BP35913 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
PDE6BP35913 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDE6BP35913 WAC-202ENST00000347934 2839 ntTSL 5 BASIC20.2■□□□□ 0.82
PDE6BP35913 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC20.2■□□□□ 0.82
PDE6BP35913 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDE6BP35913 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PDE6BP35913 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.19■□□□□ 0.82
PDE6BP35913 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDE6BP35913 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDE6BP35913 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDE6BP35913 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC20.19■□□□□ 0.82
PDE6BP35913 ANKRD19P-201ENST00000338192 862 ntBASIC20.19■□□□□ 0.82
PDE6BP35913 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PDE6BP35913 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PDE6BP35913 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC20.19■□□□□ 0.82
PDE6BP35913 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC20.19■□□□□ 0.82
PDE6BP35913 AC025048.3-201ENST00000590609 569 ntBASIC20.19■□□□□ 0.82
PDE6BP35913 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PDE6BP35913 AC084346.2-201ENST00000607097 949 ntBASIC20.19■□□□□ 0.82
PDE6BP35913 AC005702.4-201ENST00000618393 416 ntBASIC20.19■□□□□ 0.82
PDE6BP35913 SNX12-206ENST00000622259 661 ntTSL 5 BASIC20.19■□□□□ 0.82
PDE6BP35913 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.19■□□□□ 0.82
PDE6BP35913 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDE6BP35913 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
PDE6BP35913 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PDE6BP35913 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDE6BP35913 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDE6BP35913 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PDE6BP35913 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PDE6BP35913 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDE6BP35913 AL512652.2-201ENST00000625156 1716 ntBASIC20.19■□□□□ 0.82
PDE6BP35913 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
PDE6BP35913 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDE6BP35913 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
PDE6BP35913 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDE6BP35913 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PDE6BP35913 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDE6BP35913 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDE6BP35913 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDE6BP35913 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDE6BP35913 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
PDE6BP35913 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
PDE6BP35913 FO393414.2-201ENST00000405153 598 ntBASIC20.18■□□□□ 0.82
PDE6BP35913 GALT-202ENST00000450095 1280 ntTSL 2 BASIC20.18■□□□□ 0.82
PDE6BP35913 PTK7-212ENST00000476760 902 ntTSL 2 BASIC20.18■□□□□ 0.82
PDE6BP35913 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC20.18■□□□□ 0.82
PDE6BP35913 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC20.18■□□□□ 0.82
PDE6BP35913 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC20.18■□□□□ 0.82
PDE6BP35913 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC20.18■□□□□ 0.82
PDE6BP35913 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PDE6BP35913 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC20.18■□□□□ 0.82
PDE6BP35913 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDE6BP35913 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC20.18■□□□□ 0.82
PDE6BP35913 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC20.18■□□□□ 0.82
PDE6BP35913 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDE6BP35913 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDE6BP35913 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC20.18■□□□□ 0.82
PDE6BP35913 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC20.18■□□□□ 0.82
PDE6BP35913 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDE6BP35913 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDE6BP35913 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
PDE6BP35913 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDE6BP35913 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.17■□□□□ 0.82
PDE6BP35913 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDE6BP35913 PCDHB17P-201ENST00000539533 2393 ntBASIC20.17■□□□□ 0.82
PDE6BP35913 AL133338.1-201ENST00000565695 1517 ntBASIC20.17■□□□□ 0.82
PDE6BP35913 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
PDE6BP35913 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
PDE6BP35913 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
PDE6BP35913 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDE6BP35913 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
PDE6BP35913 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms