Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN7P35236 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN7P35236 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PTPN7P35236 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.12■□□□□ 0.33
PTPN7P35236 PMS2P4-201ENST00000412466 1052 ntBASIC17.12■□□□□ 0.33
PTPN7P35236 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.12■□□□□ 0.33
PTPN7P35236 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN7P35236 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.12■□□□□ 0.33
PTPN7P35236 AL031055.1-201ENST00000606362 631 ntBASIC17.12■□□□□ 0.33
PTPN7P35236 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN7P35236 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
PTPN7P35236 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN7P35236 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.12■□□□□ 0.33
PTPN7P35236 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN7P35236 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
PTPN7P35236 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN7P35236 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.11■□□□□ 0.33
PTPN7P35236 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.11■□□□□ 0.33
PTPN7P35236 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN7P35236 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN7P35236 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.11■□□□□ 0.33
PTPN7P35236 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.11■□□□□ 0.33
PTPN7P35236 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN7P35236 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN7P35236 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
PTPN7P35236 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.11■□□□□ 0.33
PTPN7P35236 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN7P35236 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.11■□□□□ 0.33
PTPN7P35236 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN7P35236 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN7P35236 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN7P35236 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN7P35236 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.11■□□□□ 0.33
PTPN7P35236 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.11■□□□□ 0.33
PTPN7P35236 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.11■□□□□ 0.33
PTPN7P35236 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN7P35236 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.11■□□□□ 0.33
PTPN7P35236 AC079781.3-201ENST00000449110 356 ntBASIC17.11■□□□□ 0.33
PTPN7P35236 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.11■□□□□ 0.33
PTPN7P35236 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.11■□□□□ 0.33
PTPN7P35236 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.11■□□□□ 0.33
PTPN7P35236 MIR7706-201ENST00000613747 67 ntBASIC17.11■□□□□ 0.33
PTPN7P35236 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
PTPN7P35236 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PTPN7P35236 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PTPN7P35236 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN7P35236 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN7P35236 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN7P35236 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN7P35236 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN7P35236 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.11■□□□□ 0.33
PTPN7P35236 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN7P35236 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.1■□□□□ 0.33
PTPN7P35236 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PTPN7P35236 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN7P35236 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN7P35236 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN7P35236 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.1■□□□□ 0.33
PTPN7P35236 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN7P35236 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN7P35236 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN7P35236 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.1■□□□□ 0.33
PTPN7P35236 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN7P35236 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.1■□□□□ 0.33
PTPN7P35236 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.1■□□□□ 0.33
PTPN7P35236 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.1■□□□□ 0.33
PTPN7P35236 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
PTPN7P35236 FAAHP1-202ENST00000446499 1238 ntBASIC17.1■□□□□ 0.33
PTPN7P35236 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.1■□□□□ 0.33
PTPN7P35236 AC108751.1-201ENST00000490852 363 ntBASIC17.1■□□□□ 0.33
PTPN7P35236 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.1■□□□□ 0.33
PTPN7P35236 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.1■□□□□ 0.33
PTPN7P35236 AL031432.2-201ENST00000566714 459 ntBASIC17.1■□□□□ 0.33
PTPN7P35236 AL928711.1-201ENST00000570165 459 ntBASIC17.1■□□□□ 0.33
PTPN7P35236 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN7P35236 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.1■□□□□ 0.33
PTPN7P35236 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.1■□□□□ 0.33
PTPN7P35236 AL773604.1-201ENST00000617417 272 ntBASIC17.1■□□□□ 0.33
PTPN7P35236 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN7P35236 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.1■□□□□ 0.33
PTPN7P35236 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN7P35236 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN7P35236 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN7P35236 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN7P35236 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.1■□□□□ 0.33
PTPN7P35236 AC105917.1-201ENST00000506637 2539 ntBASIC17.1■□□□□ 0.33
PTPN7P35236 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN7P35236 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN7P35236 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN7P35236 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.1■□□□□ 0.33
PTPN7P35236 CDC14C-201ENST00000428251 1719 ntBASIC17.1■□□□□ 0.33
PTPN7P35236 AC005622.1-201ENST00000636801 1703 ntBASIC17.1■□□□□ 0.33
PTPN7P35236 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN7P35236 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN7P35236 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN7P35236 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
PTPN7P35236 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN7P35236 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN7P35236 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN7P35236 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms