Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CNGA1P29973 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.79■□□□□ 0.6
CNGA1P29973 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CNGA1P29973 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CNGA1P29973 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.79■□□□□ 0.6
CNGA1P29973 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CNGA1P29973 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CNGA1P29973 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNGA1P29973 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNGA1P29973 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNGA1P29973 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNGA1P29973 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNGA1P29973 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.79■□□□□ 0.6
CNGA1P29973 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNGA1P29973 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CNGA1P29973 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CNGA1P29973 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CNGA1P29973 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC18.79■□□□□ 0.6
CNGA1P29973 ARSEP1-201ENST00000420443 635 ntBASIC18.79■□□□□ 0.6
CNGA1P29973 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CNGA1P29973 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.79■□□□□ 0.6
CNGA1P29973 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC18.79■□□□□ 0.6
CNGA1P29973 TP53TG3HP-202ENST00000569755 579 ntBASIC18.79■□□□□ 0.6
CNGA1P29973 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNGA1P29973 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC18.79■□□□□ 0.6
CNGA1P29973 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CNGA1P29973 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNGA1P29973 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNGA1P29973 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNGA1P29973 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNGA1P29973 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNGA1P29973 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNGA1P29973 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.79■□□□□ 0.6
CNGA1P29973 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CNGA1P29973 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNGA1P29973 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC18.79■□□□□ 0.6
CNGA1P29973 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CNGA1P29973 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.79■□□□□ 0.6
CNGA1P29973 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CNGA1P29973 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNGA1P29973 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNGA1P29973 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CNGA1P29973 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNGA1P29973 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CNGA1P29973 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNGA1P29973 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CNGA1P29973 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNGA1P29973 AC012313.1-201ENST00000593393 3059 ntBASIC18.78■□□□□ 0.6
CNGA1P29973 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CNGA1P29973 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNGA1P29973 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.78■□□□□ 0.6
CNGA1P29973 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CNGA1P29973 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CNGA1P29973 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CNGA1P29973 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.78■□□□□ 0.6
CNGA1P29973 AL353705.2-201ENST00000428243 662 ntBASIC18.78■□□□□ 0.6
CNGA1P29973 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC18.78■□□□□ 0.6
CNGA1P29973 GPR53P-205ENST00000457298 1084 ntBASIC18.78■□□□□ 0.6
CNGA1P29973 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNGA1P29973 IGHV3-71-201ENST00000523324 359 ntBASIC18.78■□□□□ 0.6
CNGA1P29973 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC18.78■□□□□ 0.6
CNGA1P29973 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC18.78■□□□□ 0.6
CNGA1P29973 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.78■□□□□ 0.6
CNGA1P29973 AL589739.1-201ENST00000607720 493 ntBASIC18.78■□□□□ 0.6
CNGA1P29973 AC008738.7-201ENST00000609744 511 ntBASIC18.78■□□□□ 0.6
CNGA1P29973 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC18.78■□□□□ 0.6
CNGA1P29973 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CNGA1P29973 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNGA1P29973 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.78■□□□□ 0.6
CNGA1P29973 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNGA1P29973 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNGA1P29973 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CNGA1P29973 AC092053.1-201ENST00000605787 1936 ntBASIC18.78■□□□□ 0.6
CNGA1P29973 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CNGA1P29973 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNGA1P29973 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CNGA1P29973 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNGA1P29973 AC138969.3-201ENST00000546612 1459 ntBASIC18.77■□□□□ 0.6
CNGA1P29973 AC138932.2-201ENST00000548268 1459 ntBASIC18.77■□□□□ 0.6
CNGA1P29973 AC126755.4-201ENST00000549796 1459 ntBASIC18.77■□□□□ 0.6
CNGA1P29973 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNGA1P29973 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNGA1P29973 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CNGA1P29973 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.77■□□□□ 0.6
CNGA1P29973 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNGA1P29973 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CNGA1P29973 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNGA1P29973 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CNGA1P29973 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNGA1P29973 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC18.77■□□□□ 0.6
CNGA1P29973 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
CNGA1P29973 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CNGA1P29973 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNGA1P29973 CETN4P-206ENST00000642099 2168 ntBASIC18.77■□□□□ 0.6
CNGA1P29973 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNGA1P29973 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.77■□□□□ 0.6
CNGA1P29973 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CNGA1P29973 HLA-H-201ENST00000383620 1096 ntBASIC18.77■□□□□ 0.6
CNGA1P29973 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNGA1P29973 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms