Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.52■□□□□ 0.72
COL4A5P29400 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.52■□□□□ 0.72
COL4A5P29400 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL4A5P29400 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC19.52■□□□□ 0.72
COL4A5P29400 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL4A5P29400 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC19.52■□□□□ 0.72
COL4A5P29400 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
COL4A5P29400 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
COL4A5P29400 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC19.52■□□□□ 0.72
COL4A5P29400 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
COL4A5P29400 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
COL4A5P29400 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
COL4A5P29400 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC19.52■□□□□ 0.71
COL4A5P29400 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC19.52■□□□□ 0.71
COL4A5P29400 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
COL4A5P29400 AC106760.1-201ENST00000508690 800 ntBASIC19.52■□□□□ 0.71
COL4A5P29400 GNRHR2-203ENST00000581100 1187 ntBASIC19.52■□□□□ 0.71
COL4A5P29400 SPIB-207ENST00000597855 564 ntTSL 4 BASIC19.52■□□□□ 0.71
COL4A5P29400 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC19.52■□□□□ 0.71
COL4A5P29400 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC19.52■□□□□ 0.71
COL4A5P29400 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
COL4A5P29400 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC19.52■□□□□ 0.71
COL4A5P29400 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
COL4A5P29400 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
COL4A5P29400 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
COL4A5P29400 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.71
COL4A5P29400 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
COL4A5P29400 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC19.51■□□□□ 0.71
COL4A5P29400 U82695.1-201ENST00000635752 1889 ntBASIC19.51■□□□□ 0.71
COL4A5P29400 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.51■□□□□ 0.71
COL4A5P29400 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.51■□□□□ 0.71
COL4A5P29400 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL4A5P29400 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL4A5P29400 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL4A5P29400 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
COL4A5P29400 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL4A5P29400 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL4A5P29400 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL4A5P29400 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC19.51■□□□□ 0.71
COL4A5P29400 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC19.51■□□□□ 0.71
COL4A5P29400 AP000812.2-201ENST00000538934 718 ntBASIC19.51■□□□□ 0.71
COL4A5P29400 APRT-204ENST00000563655 709 ntTSL 5 BASIC19.51■□□□□ 0.71
COL4A5P29400 AC243960.2-201ENST00000600996 747 ntBASIC19.51■□□□□ 0.71
COL4A5P29400 AL022328.1-201ENST00000610050 478 ntBASIC19.51■□□□□ 0.71
COL4A5P29400 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL4A5P29400 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC19.51■□□□□ 0.71
COL4A5P29400 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL4A5P29400 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
COL4A5P29400 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL4A5P29400 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL4A5P29400 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
COL4A5P29400 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL4A5P29400 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
COL4A5P29400 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC19.5■□□□□ 0.71
COL4A5P29400 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL4A5P29400 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COL4A5P29400 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC19.5■□□□□ 0.71
COL4A5P29400 APOC3-202ENST00000375345 604 ntTSL 5 BASIC19.5■□□□□ 0.71
COL4A5P29400 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COL4A5P29400 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC19.5■□□□□ 0.71
COL4A5P29400 KRT18P64-201ENST00000434946 1219 ntBASIC19.5■□□□□ 0.71
COL4A5P29400 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC19.5■□□□□ 0.71
COL4A5P29400 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COL4A5P29400 PARP8-218ENST00000513738 596 ntTSL 4 BASIC19.5■□□□□ 0.71
COL4A5P29400 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC19.5■□□□□ 0.71
COL4A5P29400 SUOX-214ENST00000551841 906 ntTSL 3 BASIC19.5■□□□□ 0.71
COL4A5P29400 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL4A5P29400 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
COL4A5P29400 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL4A5P29400 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.5■□□□□ 0.71
COL4A5P29400 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL4A5P29400 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COL4A5P29400 AL603756.1-201ENST00000606511 2163 ntBASIC19.5■□□□□ 0.71
COL4A5P29400 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
COL4A5P29400 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL4A5P29400 MGST3-203ENST00000367885 680 ntTSL 2 BASIC19.49■□□□□ 0.71
COL4A5P29400 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL4A5P29400 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC19.49■□□□□ 0.71
COL4A5P29400 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC19.49■□□□□ 0.71
COL4A5P29400 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC19.49■□□□□ 0.71
COL4A5P29400 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC19.49■□□□□ 0.71
COL4A5P29400 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC19.49■□□□□ 0.71
COL4A5P29400 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC19.49■□□□□ 0.71
COL4A5P29400 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC19.49■□□□□ 0.71
COL4A5P29400 DERL2-202ENST00000570848 657 ntTSL 5 BASIC19.49■□□□□ 0.71
COL4A5P29400 PAM16-215ENST00000577031 548 ntTSL 4 BASIC19.49■□□□□ 0.71
COL4A5P29400 MIR3615-201ENST00000581999 87 ntBASIC19.49■□□□□ 0.71
COL4A5P29400 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC19.49■□□□□ 0.71
COL4A5P29400 GRN-214ENST00000589265 1632 ntTSL 5 BASIC19.49■□□□□ 0.71
COL4A5P29400 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
COL4A5P29400 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL4A5P29400 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC19.49■□□□□ 0.71
COL4A5P29400 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
COL4A5P29400 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
COL4A5P29400 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
COL4A5P29400 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC19.49■□□□□ 0.71
COL4A5P29400 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC19.49■□□□□ 0.71
COL4A5P29400 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC19.49■□□□□ 0.71
COL4A5P29400 AC060834.1-201ENST00000443027 2032 ntBASIC19.49■□□□□ 0.71
COL4A5P29400 INTS4P2-202ENST00000614726 2019 ntBASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms