Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.18■□□□□ 0.18
EPHA3P29320 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
EPHA3P29320 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.18■□□□□ 0.18
EPHA3P29320 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
EPHA3P29320 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
EPHA3P29320 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
EPHA3P29320 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.18■□□□□ 0.18
EPHA3P29320 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.18■□□□□ 0.18
EPHA3P29320 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.18■□□□□ 0.18
EPHA3P29320 MIR4492-201ENST00000581627 80 ntBASIC16.18■□□□□ 0.18
EPHA3P29320 MPDU1-223ENST00000582151 728 ntBASIC16.18■□□□□ 0.18
EPHA3P29320 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.18■□□□□ 0.18
EPHA3P29320 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
EPHA3P29320 AC064862.7-201ENST00000604520 867 ntBASIC16.18■□□□□ 0.18
EPHA3P29320 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.18■□□□□ 0.18
EPHA3P29320 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.18■□□□□ 0.18
EPHA3P29320 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.18■□□□□ 0.18
EPHA3P29320 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
EPHA3P29320 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
EPHA3P29320 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
EPHA3P29320 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.18■□□□□ 0.18
EPHA3P29320 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.18■□□□□ 0.18
EPHA3P29320 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
EPHA3P29320 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
EPHA3P29320 AC073347.1-201ENST00000421633 2643 ntBASIC16.17■□□□□ 0.18
EPHA3P29320 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
EPHA3P29320 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
EPHA3P29320 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.17■□□□□ 0.18
EPHA3P29320 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
EPHA3P29320 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EPHA3P29320 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
EPHA3P29320 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EPHA3P29320 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EPHA3P29320 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.17■□□□□ 0.18
EPHA3P29320 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EPHA3P29320 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
EPHA3P29320 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.17■□□□□ 0.18
EPHA3P29320 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EPHA3P29320 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.17■□□□□ 0.18
EPHA3P29320 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.17■□□□□ 0.18
EPHA3P29320 TMPOP1-202ENST00000424642 1267 ntBASIC16.17■□□□□ 0.18
EPHA3P29320 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.17■□□□□ 0.18
EPHA3P29320 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.17■□□□□ 0.18
EPHA3P29320 BX005266.1-201ENST00000473402 457 ntBASIC16.17■□□□□ 0.18
EPHA3P29320 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.17■□□□□ 0.18
EPHA3P29320 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.17■□□□□ 0.18
EPHA3P29320 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.17■□□□□ 0.18
EPHA3P29320 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.17■□□□□ 0.18
EPHA3P29320 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.17■□□□□ 0.18
EPHA3P29320 AC116407.4-201ENST00000623319 1061 ntBASIC16.17■□□□□ 0.18
EPHA3P29320 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
EPHA3P29320 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
EPHA3P29320 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EPHA3P29320 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
EPHA3P29320 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
EPHA3P29320 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
EPHA3P29320 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
EPHA3P29320 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
EPHA3P29320 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
EPHA3P29320 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
EPHA3P29320 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
EPHA3P29320 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
EPHA3P29320 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EPHA3P29320 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EPHA3P29320 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EPHA3P29320 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.16■□□□□ 0.18
EPHA3P29320 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.16■□□□□ 0.18
EPHA3P29320 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EPHA3P29320 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
EPHA3P29320 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
EPHA3P29320 PCGF3-213ENST00000620529 1899 ntBASIC16.16■□□□□ 0.18
EPHA3P29320 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.16■□□□□ 0.18
EPHA3P29320 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
EPHA3P29320 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EPHA3P29320 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EPHA3P29320 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
EPHA3P29320 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EPHA3P29320 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
EPHA3P29320 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
EPHA3P29320 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EPHA3P29320 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EPHA3P29320 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EPHA3P29320 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.16■□□□□ 0.18
EPHA3P29320 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
EPHA3P29320 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.16■□□□□ 0.18
EPHA3P29320 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.16■□□□□ 0.18
EPHA3P29320 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.16■□□□□ 0.18
EPHA3P29320 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.16■□□□□ 0.18
EPHA3P29320 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
EPHA3P29320 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
EPHA3P29320 MIR5100-201ENST00000579544 119 ntBASIC16.16■□□□□ 0.18
EPHA3P29320 AC092329.2-201ENST00000598402 547 ntBASIC16.16■□□□□ 0.18
EPHA3P29320 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.16■□□□□ 0.18
EPHA3P29320 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EPHA3P29320 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EPHA3P29320 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
EPHA3P29320 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.16■□□□□ 0.18
EPHA3P29320 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
EPHA3P29320 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EPHA3P29320 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms