Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
PTPN3P26045 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.89■□□□□ 0.29
PTPN3P26045 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN3P26045 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.89■□□□□ 0.29
PTPN3P26045 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN3P26045 AC106730.1-201ENST00000566722 1090 ntBASIC16.89■□□□□ 0.29
PTPN3P26045 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.89■□□□□ 0.29
PTPN3P26045 AL009183.1-201ENST00000603760 355 ntBASIC16.89■□□□□ 0.29
PTPN3P26045 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.89■□□□□ 0.29
PTPN3P26045 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN3P26045 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
PTPN3P26045 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN3P26045 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN3P26045 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.89■□□□□ 0.29
PTPN3P26045 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN3P26045 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN3P26045 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN3P26045 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.89■□□□□ 0.29
PTPN3P26045 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN3P26045 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
PTPN3P26045 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN3P26045 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PTPN3P26045 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN3P26045 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN3P26045 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.88■□□□□ 0.29
PTPN3P26045 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN3P26045 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN3P26045 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
PTPN3P26045 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PTPN3P26045 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN3P26045 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.88■□□□□ 0.29
PTPN3P26045 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN3P26045 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PTPN3P26045 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN3P26045 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN3P26045 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN3P26045 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.88■□□□□ 0.29
PTPN3P26045 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN3P26045 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.88■□□□□ 0.29
PTPN3P26045 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.88■□□□□ 0.29
PTPN3P26045 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN3P26045 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
PTPN3P26045 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.88■□□□□ 0.29
PTPN3P26045 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.88■□□□□ 0.29
PTPN3P26045 AC109635.5-201ENST00000533593 962 ntBASIC16.88■□□□□ 0.29
PTPN3P26045 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.88■□□□□ 0.29
PTPN3P26045 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.88■□□□□ 0.29
PTPN3P26045 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.88■□□□□ 0.29
PTPN3P26045 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.88■□□□□ 0.29
PTPN3P26045 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN3P26045 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN3P26045 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.88■□□□□ 0.29
PTPN3P26045 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN3P26045 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
PTPN3P26045 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN3P26045 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN3P26045 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN3P26045 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PTPN3P26045 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PTPN3P26045 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PTPN3P26045 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
PTPN3P26045 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN3P26045 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.87■□□□□ 0.29
PTPN3P26045 AL513523.2-202ENST00000427283 2040 ntBASIC16.87■□□□□ 0.29
PTPN3P26045 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN3P26045 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN3P26045 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.87■□□□□ 0.29
PTPN3P26045 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN3P26045 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN3P26045 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN3P26045 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN3P26045 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN3P26045 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN3P26045 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN3P26045 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN3P26045 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN3P26045 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN3P26045 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN3P26045 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN3P26045 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.87■□□□□ 0.29
PTPN3P26045 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.87■□□□□ 0.29
PTPN3P26045 AC140658.5-201ENST00000438532 169 ntBASIC16.87■□□□□ 0.29
PTPN3P26045 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.87■□□□□ 0.29
PTPN3P26045 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.87■□□□□ 0.29
PTPN3P26045 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PTPN3P26045 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN3P26045 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.87■□□□□ 0.29
PTPN3P26045 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
PTPN3P26045 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.87■□□□□ 0.29
PTPN3P26045 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.87■□□□□ 0.29
PTPN3P26045 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.87■□□□□ 0.29
PTPN3P26045 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.87■□□□□ 0.29
PTPN3P26045 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.87■□□□□ 0.29
PTPN3P26045 AC140113.2-201ENST00000604370 208 ntBASIC16.87■□□□□ 0.29
PTPN3P26045 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.87■□□□□ 0.29
PTPN3P26045 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.87■□□□□ 0.29
PTPN3P26045 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.87■□□□□ 0.29
PTPN3P26045 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN3P26045 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PTPN3P26045 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms