Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CCND1P24385 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.76■□□□□ 0.27
CCND1P24385 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCND1P24385 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCND1P24385 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CCND1P24385 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.75■□□□□ 0.27
CCND1P24385 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCND1P24385 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.75■□□□□ 0.27
CCND1P24385 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCND1P24385 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCND1P24385 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.75■□□□□ 0.27
CCND1P24385 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.75■□□□□ 0.27
CCND1P24385 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCND1P24385 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCND1P24385 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CCND1P24385 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.75■□□□□ 0.27
CCND1P24385 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCND1P24385 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCND1P24385 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCND1P24385 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCND1P24385 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.75■□□□□ 0.27
CCND1P24385 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCND1P24385 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCND1P24385 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCND1P24385 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
CCND1P24385 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.75■□□□□ 0.27
CCND1P24385 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.75■□□□□ 0.27
CCND1P24385 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
CCND1P24385 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CCND1P24385 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCND1P24385 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.75■□□□□ 0.27
CCND1P24385 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CCND1P24385 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.75■□□□□ 0.27
CCND1P24385 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.75■□□□□ 0.27
CCND1P24385 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCND1P24385 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCND1P24385 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCND1P24385 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.75■□□□□ 0.27
CCND1P24385 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCND1P24385 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCND1P24385 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCND1P24385 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCND1P24385 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.75■□□□□ 0.27
CCND1P24385 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCND1P24385 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.75■□□□□ 0.27
CCND1P24385 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCND1P24385 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCND1P24385 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCND1P24385 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCND1P24385 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.75■□□□□ 0.27
CCND1P24385 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCND1P24385 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CCND1P24385 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCND1P24385 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCND1P24385 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCND1P24385 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CCND1P24385 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CCND1P24385 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCND1P24385 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCND1P24385 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCND1P24385 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCND1P24385 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CCND1P24385 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCND1P24385 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.74■□□□□ 0.27
CCND1P24385 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.74■□□□□ 0.27
CCND1P24385 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCND1P24385 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCND1P24385 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCND1P24385 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.74■□□□□ 0.27
CCND1P24385 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCND1P24385 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
CCND1P24385 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.74■□□□□ 0.27
CCND1P24385 FGFR3P6-201ENST00000457012 610 ntBASIC16.74■□□□□ 0.27
CCND1P24385 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.74■□□□□ 0.27
CCND1P24385 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CCND1P24385 NKAPP1-205ENST00000585790 367 ntBASIC16.74■□□□□ 0.27
CCND1P24385 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.74■□□□□ 0.27
CCND1P24385 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.74■□□□□ 0.27
CCND1P24385 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCND1P24385 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCND1P24385 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCND1P24385 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCND1P24385 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCND1P24385 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCND1P24385 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.74■□□□□ 0.27
CCND1P24385 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.74■□□□□ 0.27
CCND1P24385 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CCND1P24385 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CCND1P24385 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCND1P24385 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCND1P24385 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCND1P24385 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCND1P24385 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCND1P24385 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCND1P24385 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CCND1P24385 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CCND1P24385 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCND1P24385 AL009178.2-201ENST00000597278 2719 ntBASIC16.73■□□□□ 0.27
CCND1P24385 NCF1C-201ENST00000438382 1427 ntBASIC16.73■□□□□ 0.27
CCND1P24385 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms