Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VAMP1P23763 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.07□□□□□ -0.16
VAMP1P23763 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VAMP1P23763 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VAMP1P23763 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VAMP1P23763 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VAMP1P23763 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC14.06□□□□□ -0.16
VAMP1P23763 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VAMP1P23763 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.06□□□□□ -0.16
VAMP1P23763 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.06□□□□□ -0.16
VAMP1P23763 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VAMP1P23763 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
VAMP1P23763 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
VAMP1P23763 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.06□□□□□ -0.16
VAMP1P23763 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.06□□□□□ -0.16
VAMP1P23763 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VAMP1P23763 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VAMP1P23763 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.06□□□□□ -0.16
VAMP1P23763 AL049757.1-201ENST00000616842 1596 ntBASIC14.06□□□□□ -0.16
VAMP1P23763 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VAMP1P23763 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VAMP1P23763 FAM8A6P-201ENST00000407496 1135 ntBASIC14.06□□□□□ -0.16
VAMP1P23763 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
VAMP1P23763 AL158047.1-201ENST00000445918 881 ntBASIC14.06□□□□□ -0.16
VAMP1P23763 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
VAMP1P23763 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC14.06□□□□□ -0.16
VAMP1P23763 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
VAMP1P23763 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VAMP1P23763 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC14.06□□□□□ -0.16
VAMP1P23763 ZNF444P1-201ENST00000559497 298 ntBASIC14.06□□□□□ -0.16
VAMP1P23763 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC14.06□□□□□ -0.16
VAMP1P23763 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
VAMP1P23763 FAM87A-204ENST00000613235 858 ntBASIC14.06□□□□□ -0.16
VAMP1P23763 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
VAMP1P23763 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VAMP1P23763 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC14.06□□□□□ -0.16
VAMP1P23763 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VAMP1P23763 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
VAMP1P23763 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
VAMP1P23763 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
VAMP1P23763 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VAMP1P23763 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VAMP1P23763 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.06□□□□□ -0.16
VAMP1P23763 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VAMP1P23763 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VAMP1P23763 ST20-AS1-201ENST00000560255 4223 ntBASIC14.06□□□□□ -0.16
VAMP1P23763 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.06□□□□□ -0.16
VAMP1P23763 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VAMP1P23763 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
VAMP1P23763 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VAMP1P23763 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VAMP1P23763 KRT8P10-201ENST00000450021 1447 ntBASIC14.06□□□□□ -0.16
VAMP1P23763 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
VAMP1P23763 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VAMP1P23763 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
VAMP1P23763 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
VAMP1P23763 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
VAMP1P23763 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.05□□□□□ -0.16
VAMP1P23763 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VAMP1P23763 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
VAMP1P23763 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
VAMP1P23763 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VAMP1P23763 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
VAMP1P23763 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.05□□□□□ -0.16
VAMP1P23763 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VAMP1P23763 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
VAMP1P23763 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VAMP1P23763 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.05□□□□□ -0.16
VAMP1P23763 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.05□□□□□ -0.16
VAMP1P23763 AC103564.2-201ENST00000432853 1299 ntBASIC14.05□□□□□ -0.16
VAMP1P23763 STK19B-204ENST00000512515 211 ntBASIC14.05□□□□□ -0.16
VAMP1P23763 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
VAMP1P23763 DHDH-203ENST00000522614 776 ntTSL 5 BASIC14.05□□□□□ -0.16
VAMP1P23763 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC14.05□□□□□ -0.16
VAMP1P23763 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
VAMP1P23763 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC14.05□□□□□ -0.16
VAMP1P23763 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
VAMP1P23763 GPR32P1-201ENST00000601788 811 ntBASIC14.05□□□□□ -0.16
VAMP1P23763 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
VAMP1P23763 Z99916.2-201ENST00000604037 246 ntBASIC14.05□□□□□ -0.16
VAMP1P23763 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VAMP1P23763 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VAMP1P23763 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VAMP1P23763 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VAMP1P23763 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VAMP1P23763 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VAMP1P23763 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VAMP1P23763 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
VAMP1P23763 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
VAMP1P23763 AL021920.2-201ENST00000624828 1351 ntBASIC14.05□□□□□ -0.16
VAMP1P23763 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
VAMP1P23763 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VAMP1P23763 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VAMP1P23763 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
VAMP1P23763 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
VAMP1P23763 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VAMP1P23763 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14.05□□□□□ -0.16
VAMP1P23763 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.05□□□□□ -0.16
VAMP1P23763 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
VAMP1P23763 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms