Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.4■□□□□ 0.38
MMP8P22894 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MMP8P22894 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
MMP8P22894 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.4■□□□□ 0.38
MMP8P22894 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.4■□□□□ 0.38
MMP8P22894 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.4■□□□□ 0.38
MMP8P22894 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.4■□□□□ 0.38
MMP8P22894 AL078644.1-201ENST00000609881 752 ntBASIC17.4■□□□□ 0.38
MMP8P22894 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MMP8P22894 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.4■□□□□ 0.38
MMP8P22894 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MMP8P22894 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.4■□□□□ 0.38
MMP8P22894 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.4■□□□□ 0.38
MMP8P22894 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.4■□□□□ 0.38
MMP8P22894 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
MMP8P22894 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MMP8P22894 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MMP8P22894 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.4■□□□□ 0.38
MMP8P22894 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MMP8P22894 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.4■□□□□ 0.38
MMP8P22894 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.4■□□□□ 0.38
MMP8P22894 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.4■□□□□ 0.38
MMP8P22894 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
MMP8P22894 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MMP8P22894 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MMP8P22894 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
MMP8P22894 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.38
MMP8P22894 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
MMP8P22894 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
MMP8P22894 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MMP8P22894 AC016027.1-202ENST00000607927 1699 ntBASIC17.39■□□□□ 0.37
MMP8P22894 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.39■□□□□ 0.37
MMP8P22894 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MMP8P22894 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MMP8P22894 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
MMP8P22894 AL592424.1-201ENST00000563624 1536 ntBASIC17.39■□□□□ 0.37
MMP8P22894 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MMP8P22894 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
MMP8P22894 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.39■□□□□ 0.37
MMP8P22894 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.39■□□□□ 0.37
MMP8P22894 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.39■□□□□ 0.37
MMP8P22894 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MMP8P22894 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
MMP8P22894 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MMP8P22894 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
MMP8P22894 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.39■□□□□ 0.37
MMP8P22894 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MMP8P22894 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MMP8P22894 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.39■□□□□ 0.37
MMP8P22894 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
MMP8P22894 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MMP8P22894 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MMP8P22894 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.39■□□□□ 0.37
MMP8P22894 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MMP8P22894 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MMP8P22894 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MMP8P22894 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MMP8P22894 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
MMP8P22894 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MMP8P22894 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
MMP8P22894 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MMP8P22894 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.38■□□□□ 0.37
MMP8P22894 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.38■□□□□ 0.37
MMP8P22894 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MMP8P22894 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.38■□□□□ 0.37
MMP8P22894 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
MMP8P22894 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MMP8P22894 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
MMP8P22894 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MMP8P22894 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MMP8P22894 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MMP8P22894 AC093724.1-201ENST00000448659 1027 ntBASIC17.38■□□□□ 0.37
MMP8P22894 KRT18P34-201ENST00000488218 1270 ntBASIC17.38■□□□□ 0.37
MMP8P22894 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
MMP8P22894 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
MMP8P22894 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.38■□□□□ 0.37
MMP8P22894 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.38■□□□□ 0.37
MMP8P22894 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.38■□□□□ 0.37
MMP8P22894 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
MMP8P22894 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MMP8P22894 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.38■□□□□ 0.37
MMP8P22894 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MMP8P22894 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MMP8P22894 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MMP8P22894 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.38■□□□□ 0.37
MMP8P22894 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MMP8P22894 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
MMP8P22894 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MMP8P22894 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MMP8P22894 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
MMP8P22894 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MMP8P22894 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MMP8P22894 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MMP8P22894 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.37■□□□□ 0.37
MMP8P22894 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MMP8P22894 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.37■□□□□ 0.37
MMP8P22894 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MMP8P22894 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.37■□□□□ 0.37
MMP8P22894 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.37■□□□□ 0.37
MMP8P22894 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms