Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.3■□□□□ 0.2
CDH3P22223 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH3P22223 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.3■□□□□ 0.2
CDH3P22223 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.3■□□□□ 0.2
CDH3P22223 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDH3P22223 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH3P22223 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.3■□□□□ 0.2
CDH3P22223 RPS8P6-201ENST00000426177 609 ntBASIC16.3■□□□□ 0.2
CDH3P22223 HTR5BP-201ENST00000430851 1154 ntBASIC16.3■□□□□ 0.2
CDH3P22223 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.3■□□□□ 0.2
CDH3P22223 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.3■□□□□ 0.2
CDH3P22223 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CDH3P22223 AC005412.3-201ENST00000580309 715 ntBASIC16.3■□□□□ 0.2
CDH3P22223 AC068137.2-201ENST00000605408 478 ntBASIC16.3■□□□□ 0.2
CDH3P22223 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.3■□□□□ 0.2
CDH3P22223 REXO1L3P-201ENST00000622202 1288 ntBASIC16.3■□□□□ 0.2
CDH3P22223 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH3P22223 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.3■□□□□ 0.2
CDH3P22223 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDH3P22223 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
CDH3P22223 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDH3P22223 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH3P22223 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH3P22223 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH3P22223 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.3■□□□□ 0.2
CDH3P22223 FRMD8P1-201ENST00000440433 1524 ntBASIC16.29■□□□□ 0.2
CDH3P22223 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH3P22223 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH3P22223 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDH3P22223 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH3P22223 AL021920.2-201ENST00000624828 1351 ntBASIC16.29■□□□□ 0.2
CDH3P22223 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH3P22223 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDH3P22223 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH3P22223 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH3P22223 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.29■□□□□ 0.2
CDH3P22223 LINC02012-201ENST00000608206 1725 ntBASIC16.29■□□□□ 0.2
CDH3P22223 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH3P22223 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.29■□□□□ 0.2
CDH3P22223 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH3P22223 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH3P22223 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.29■□□□□ 0.2
CDH3P22223 AC211486.1-202ENST00000416371 468 ntBASIC16.29■□□□□ 0.2
CDH3P22223 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.29■□□□□ 0.2
CDH3P22223 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH3P22223 FAM58CP-201ENST00000435741 640 ntBASIC16.29■□□□□ 0.2
CDH3P22223 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CDH3P22223 AC211476.1-201ENST00000503899 468 ntBASIC16.29■□□□□ 0.2
CDH3P22223 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.29■□□□□ 0.2
CDH3P22223 AC079781.4-201ENST00000641908 219 ntBASIC16.29■□□□□ 0.2
CDH3P22223 AL645728.2-201ENST00000641974 660 ntBASIC16.29■□□□□ 0.2
CDH3P22223 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.29■□□□□ 0.2
CDH3P22223 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH3P22223 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.29■□□□□ 0.2
CDH3P22223 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDH3P22223 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.29■□□□□ 0.2
CDH3P22223 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH3P22223 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.29■□□□□ 0.2
CDH3P22223 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CDH3P22223 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH3P22223 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH3P22223 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.29■□□□□ 0.2
CDH3P22223 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH3P22223 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDH3P22223 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.29■□□□□ 0.2
CDH3P22223 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDH3P22223 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH3P22223 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CDH3P22223 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH3P22223 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
CDH3P22223 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH3P22223 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH3P22223 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH3P22223 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.28■□□□□ 0.2
CDH3P22223 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH3P22223 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH3P22223 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH3P22223 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.28■□□□□ 0.2
CDH3P22223 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDH3P22223 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH3P22223 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH3P22223 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH3P22223 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CDH3P22223 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH3P22223 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.28■□□□□ 0.2
CDH3P22223 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH3P22223 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.28■□□□□ 0.2
CDH3P22223 MKNK2P1-201ENST00000437526 628 ntBASIC16.28■□□□□ 0.2
CDH3P22223 AC004967.1-201ENST00000453589 447 ntBASIC16.28■□□□□ 0.2
CDH3P22223 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.28■□□□□ 0.2
CDH3P22223 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.28■□□□□ 0.2
CDH3P22223 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDH3P22223 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.28■□□□□ 0.2
CDH3P22223 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.28■□□□□ 0.2
CDH3P22223 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH3P22223 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDH3P22223 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH3P22223 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH3P22223 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH3P22223 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms