Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.58□□□□□ -0.07
RAB3BP20337 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
RAB3BP20337 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB3BP20337 LGALS8-AS1-201ENST00000487567 1457 ntBASIC14.58□□□□□ -0.08
RAB3BP20337 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.58□□□□□ -0.08
RAB3BP20337 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RAB3BP20337 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
RAB3BP20337 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB3BP20337 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.58□□□□□ -0.08
RAB3BP20337 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
RAB3BP20337 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB3BP20337 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC14.58□□□□□ -0.08
RAB3BP20337 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RAB3BP20337 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.58□□□□□ -0.08
RAB3BP20337 KRT18P38-201ENST00000449496 1282 ntBASIC14.58□□□□□ -0.08
RAB3BP20337 HOMER2P1-201ENST00000455653 964 ntBASIC14.58□□□□□ -0.08
RAB3BP20337 LINC02447-202ENST00000501888 2146 ntBASIC14.58□□□□□ -0.08
RAB3BP20337 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB3BP20337 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB3BP20337 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB3BP20337 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
RAB3BP20337 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
RAB3BP20337 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB3BP20337 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.58□□□□□ -0.08
RAB3BP20337 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB3BP20337 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RAB3BP20337 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RAB3BP20337 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RAB3BP20337 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
RAB3BP20337 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC14.58□□□□□ -0.08
RAB3BP20337 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB3BP20337 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.58□□□□□ -0.08
RAB3BP20337 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
RAB3BP20337 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RAB3BP20337 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3BP20337 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3BP20337 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
RAB3BP20337 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3BP20337 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3BP20337 AC112504.1-201ENST00000623415 1841 ntBASIC14.57□□□□□ -0.08
RAB3BP20337 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3BP20337 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.57□□□□□ -0.08
RAB3BP20337 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.57□□□□□ -0.08
RAB3BP20337 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3BP20337 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.57□□□□□ -0.08
RAB3BP20337 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
RAB3BP20337 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
RAB3BP20337 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
RAB3BP20337 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
RAB3BP20337 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3BP20337 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.57□□□□□ -0.08
RAB3BP20337 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.57□□□□□ -0.08
RAB3BP20337 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
RAB3BP20337 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3BP20337 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.57□□□□□ -0.08
RAB3BP20337 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3BP20337 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3BP20337 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3BP20337 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3BP20337 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3BP20337 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
RAB3BP20337 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.57□□□□□ -0.08
RAB3BP20337 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.57□□□□□ -0.08
RAB3BP20337 BX664615.1-201ENST00000443558 458 ntBASIC14.57□□□□□ -0.08
RAB3BP20337 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC14.57□□□□□ -0.08
RAB3BP20337 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3BP20337 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.57□□□□□ -0.08
RAB3BP20337 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC14.57□□□□□ -0.08
RAB3BP20337 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC14.57□□□□□ -0.08
RAB3BP20337 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
RAB3BP20337 AC011467.2-201ENST00000598425 242 ntBASIC14.57□□□□□ -0.08
RAB3BP20337 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
RAB3BP20337 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.57□□□□□ -0.08
RAB3BP20337 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.57□□□□□ -0.08
RAB3BP20337 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.57□□□□□ -0.08
RAB3BP20337 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3BP20337 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3BP20337 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.57□□□□□ -0.08
RAB3BP20337 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3BP20337 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.57□□□□□ -0.08
RAB3BP20337 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.57□□□□□ -0.08
RAB3BP20337 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3BP20337 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3BP20337 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
RAB3BP20337 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.57□□□□□ -0.08
RAB3BP20337 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.57□□□□□ -0.08
RAB3BP20337 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
RAB3BP20337 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3BP20337 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3BP20337 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3BP20337 REXO1L8P-201ENST00000604378 1897 ntBASIC14.57□□□□□ -0.08
RAB3BP20337 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3BP20337 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RAB3BP20337 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.57□□□□□ -0.08
RAB3BP20337 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3BP20337 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3BP20337 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3BP20337 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
RAB3BP20337 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3BP20337 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms