| MUC1 | P15941 | SLC9A6-203 | ENST00000370701 | 4755 nt | TSL 1 (best) BASIC | 14.26 | □□□□□ -0.13 | | |
| MUC1 | P15941 | MEN1-207 | ENST00000377326 | 3150 nt | APPRIS ALT1 TSL 5 BASIC | 14.26 | □□□□□ -0.13 | | |
| MUC1 | P15941 | TMEM50B-210 | ENST00000542230 | 2375 nt | APPRIS P1 TSL 1 (best) BASIC | 14.26 | □□□□□ -0.13 | | |
| MUC1 | P15941 | PML-215 | ENST00000565898 | 5393 nt | APPRIS ALT2 TSL 1 (best) BASIC | 14.26 | □□□□□ -0.13 | | |
| MUC1 | P15941 | GOLGA2-213 | ENST00000610329 | 2212 nt | TSL 2 BASIC | 14.26 | □□□□□ -0.13 | | |
| MUC1 | P15941 | GCAT-201 | ENST00000248924 | 1497 nt | APPRIS P1 TSL 1 (best) BASIC | 14.26 | □□□□□ -0.13 | | |
| MUC1 | P15941 | FOS-208 | ENST00000555686 | 1496 nt | TSL 2 BASIC | 14.26 | □□□□□ -0.13 | | |
| MUC1 | P15941 | RNFT2-203 | ENST00000392549 | 2896 nt | APPRIS P1 TSL 5 BASIC | 14.26 | □□□□□ -0.13 | | |
| MUC1 | P15941 | SLC27A1-201 | ENST00000252595 | 3594 nt | APPRIS P1 TSL 1 (best) BASIC | 14.26 | □□□□□ -0.13 | | |
| MUC1 | P15941 | L2HGDH-202 | ENST00000267436 | 6414 nt | APPRIS P1 TSL 1 (best) BASIC | 14.26 | □□□□□ -0.13 | | |
| MUC1 | P15941 | RAPGEFL1-209 | ENST00000544503 | 2079 nt | TSL 2 BASIC | 14.26 | □□□□□ -0.13 | | |
| MUC1 | P15941 | HMGN1-204 | ENST00000380749 | 1383 nt | APPRIS P1 TSL 1 (best) BASIC | 14.26 | □□□□□ -0.13 | | |
| MUC1 | P15941 | BCAT2-202 | ENST00000402551 | 2041 nt | TSL 2 BASIC | 14.26 | □□□□□ -0.13 | | |
| MUC1 | P15941 | KLHDC8B-201 | ENST00000332780 | 1959 nt | APPRIS P1 TSL 1 (best) BASIC | 14.26 | □□□□□ -0.13 | | |
| MUC1 | P15941 | DIABLO-208 | ENST00000464942 | 2569 nt | TSL 1 (best) BASIC | 14.26 | □□□□□ -0.13 | | |
| MUC1 | P15941 | MOCS1-206 | ENST00000425303 | 1920 nt | TSL 2 BASIC | 14.26 | □□□□□ -0.13 | | |
| MUC1 | P15941 | STX10-201 | ENST00000242770 | 1099 nt | TSL 1 (best) BASIC | 14.26 | □□□□□ -0.13 | | |
| MUC1 | P15941 | ZNF789-202 | ENST00000379724 | 510 nt | TSL 2 BASIC | 14.26 | □□□□□ -0.13 | | |
| MUC1 | P15941 | RFXANK-203 | ENST00000407360 | 1212 nt | APPRIS P1 TSL 1 (best) BASIC | 14.26 | □□□□□ -0.13 | | |
| MUC1 | P15941 | SATB1-AS1-201 | ENST00000414198 | 737 nt | TSL 2 BASIC | 14.26 | □□□□□ -0.13 | | |
| MUC1 | P15941 | AL590627.1-203 | ENST00000421194 | 1026 nt | BASIC | 14.26 | □□□□□ -0.13 | | |
| MUC1 | P15941 | MOBP-208 | ENST00000441980 | 830 nt | APPRIS P4 TSL 4 BASIC | 14.26 | □□□□□ -0.13 | | |
| MUC1 | P15941 | AC007834.1-201 | ENST00000446473 | 728 nt | TSL 3 BASIC | 14.26 | □□□□□ -0.13 | | |
| MUC1 | P15941 | AC108073.2-201 | ENST00000464002 | 357 nt | BASIC | 14.26 | □□□□□ -0.13 | | |
| MUC1 | P15941 | RNA5SP415-201 | ENST00000517246 | 115 nt | BASIC | 14.26 | □□□□□ -0.13 | | |
| MUC1 | P15941 | FIBP-212 | ENST00000533045 | 1173 nt | TSL 5 BASIC | 14.26 | □□□□□ -0.13 | | |
| MUC1 | P15941 | C12orf76-202 | ENST00000546627 | 461 nt | TSL 4 BASIC | 14.26 | □□□□□ -0.13 | | |
| MUC1 | P15941 | SEC23A-206 | ENST00000553970 | 574 nt | TSL 4 BASIC | 14.26 | □□□□□ -0.13 | | |
| MUC1 | P15941 | CIPC-205 | ENST00000555437 | 566 nt | TSL 3 BASIC | 14.26 | □□□□□ -0.13 | | |
| MUC1 | P15941 | MIEN1-205 | ENST00000577810 | 806 nt | TSL 3 BASIC | 14.26 | □□□□□ -0.13 | | |
| MUC1 | P15941 | TCAP-202 | ENST00000578283 | 583 nt | TSL 5 BASIC | 14.26 | □□□□□ -0.13 | | |
| MUC1 | P15941 | STX10-204 | ENST00000587230 | 1136 nt | APPRIS P1 TSL 1 (best) BASIC | 14.26 | □□□□□ -0.13 | | |
| MUC1 | P15941 | AC012366.1-201 | ENST00000615411 | 473 nt | TSL 5 BASIC | 14.26 | □□□□□ -0.13 | | |
| MUC1 | P15941 | AC010654.1-201 | ENST00000615722 | 808 nt | BASIC | 14.26 | □□□□□ -0.13 | | |
| MUC1 | P15941 | GRAMD2B-201 | ENST00000285689 | 3175 nt | APPRIS P1 TSL 1 (best) BASIC | 14.26 | □□□□□ -0.13 | | |
| MUC1 | P15941 | RUSC1-205 | ENST00000368354 | 3114 nt | TSL 2 BASIC | 14.26 | □□□□□ -0.13 | | |
| MUC1 | P15941 | ADCYAP1R1-203 | ENST00000409363 | 1889 nt | APPRIS ALT2 TSL 1 (best) BASIC | 14.26 | □□□□□ -0.13 | | |
| MUC1 | P15941 | LSP1-217 | ENST00000612798 | 1881 nt | APPRIS ALT2 TSL 2 BASIC | 14.26 | □□□□□ -0.13 | | |
| MUC1 | P15941 | DGAT1-206 | ENST00000528718 | 3711 nt | APPRIS P1 TSL 1 (best) BASIC | 14.26 | □□□□□ -0.13 | | |
| MUC1 | P15941 | NFATC4-208 | ENST00000553708 | 5367 nt | APPRIS ALT2 TSL 1 (best) BASIC | 14.26 | □□□□□ -0.13 | | |
| MUC1 | P15941 | FMO5-208 | ENST00000578284 | 1784 nt | TSL 5 BASIC | 14.26 | □□□□□ -0.13 | | |
| MUC1 | P15941 | OTX1-201 | ENST00000282549 | 2861 nt | APPRIS P1 TSL 1 (best) BASIC | 14.26 | □□□□□ -0.13 | | |
| MUC1 | P15941 | OTX1-202 | ENST00000366671 | 2861 nt | APPRIS P1 TSL 3 BASIC | 14.26 | □□□□□ -0.13 | | |
| MUC1 | P15941 | ZNF131-214 | ENST00000509634 | 3340 nt | APPRIS P1 TSL 5 BASIC | 14.26 | □□□□□ -0.13 | | |
| MUC1 | P15941 | TLE2-201 | ENST00000262953 | 2705 nt | APPRIS P3 TSL 1 (best) BASIC | 14.26 | □□□□□ -0.13 | | |
| MUC1 | P15941 | NSMCE3-201 | ENST00000332303 | 4838 nt | APPRIS P1 BASIC | 14.26 | □□□□□ -0.13 | | |
| MUC1 | P15941 | HEYL-201 | ENST00000372852 | 3661 nt | APPRIS P1 TSL 1 (best) BASIC | 14.26 | □□□□□ -0.13 | | |
| MUC1 | P15941 | RUNDC3B-203 | ENST00000394654 | 2064 nt | APPRIS P4 TSL 2 BASIC | 14.26 | □□□□□ -0.13 | | |
| MUC1 | P15941 | INPP4A-202 | ENST00000409016 | 9996 nt | APPRIS P1 TSL 1 (best) BASIC | 14.25 | □□□□□ -0.13 | | |
| MUC1 | P15941 | DUSP18-201 | ENST00000334679 | 2479 nt | APPRIS P1 TSL 1 (best) BASIC | 14.25 | □□□□□ -0.13 | | |
| MUC1 | P15941 | GPER1-206 | ENST00000617001 | 1900 nt | TSL 5 BASIC | 14.25 | □□□□□ -0.13 | | |
| MUC1 | P15941 | PCDHA1-203 | ENST00000504120 | 5263 nt | APPRIS P1 TSL 1 (best) BASIC | 14.25 | □□□□□ -0.13 | | |
| MUC1 | P15941 | PDZRN3-201 | ENST00000263666 | 4248 nt | APPRIS P1 TSL 1 (best) BASIC | 14.25 | □□□□□ -0.13 | | |
| MUC1 | P15941 | AC026412.1-203 | ENST00000507841 | 2338 nt | TSL 1 (best) BASIC | 14.25 | □□□□□ -0.13 | | |
| MUC1 | P15941 | FGFBP1-201 | ENST00000382333 | 1359 nt | APPRIS P1 TSL 3 BASIC | 14.25 | □□□□□ -0.13 | | |
| MUC1 | P15941 | PLTP-205 | ENST00000477313 | 2255 nt | APPRIS P1 TSL 1 (best) BASIC | 14.25 | □□□□□ -0.13 | | |
| MUC1 | P15941 | ITSN1-209 | ENST00000399352 | 5408 nt | TSL 1 (best) BASIC | 14.25 | □□□□□ -0.13 | | |
| MUC1 | P15941 | TMEM155-202 | ENST00000394394 | 1753 nt | APPRIS P2 TSL 3 BASIC | 14.25 | □□□□□ -0.13 | | |
| MUC1 | P15941 | MGRN1-201 | ENST00000262370 | 3968 nt | APPRIS P3 TSL 1 (best) BASIC | 14.25 | □□□□□ -0.13 | | |
| MUC1 | P15941 | IL9RP2-201 | ENST00000423948 | 1312 nt | BASIC | 14.25 | □□□□□ -0.13 | | |
| MUC1 | P15941 | PRMT1-202 | ENST00000454376 | 1327 nt | TSL 1 (best) BASIC | 14.25 | □□□□□ -0.13 | | |
| MUC1 | P15941 | LMNA-202 | ENST00000361308 | 1713 nt | TSL 5 BASIC | 14.25 | □□□□□ -0.13 | | |
| MUC1 | P15941 | YIF1B-203 | ENST00000339413 | 1225 nt | APPRIS P1 TSL 1 (best) BASIC | 14.25 | □□□□□ -0.13 | | |
| MUC1 | P15941 | ART5-201 | ENST00000359918 | 1241 nt | APPRIS P1 TSL 1 (best) BASIC | 14.25 | □□□□□ -0.13 | | |
| MUC1 | P15941 | CAP1-205 | ENST00000372802 | 2964 nt | APPRIS ALT1 TSL 5 BASIC | 14.25 | □□□□□ -0.13 | | |
| MUC1 | P15941 | PCDH1-203 | ENST00000394536 | 3827 nt | APPRIS ALT2 TSL 1 (best) BASIC | 14.25 | □□□□□ -0.13 | | |
| MUC1 | P15941 | C1orf226-202 | ENST00000426197 | 1049 nt | APPRIS P3 TSL 2 BASIC | 14.25 | □□□□□ -0.13 | | |
| MUC1 | P15941 | LINC00596-201 | ENST00000559615 | 937 nt | TSL 5 BASIC | 14.25 | □□□□□ -0.13 | | |
| MUC1 | P15941 | AC104640.1-201 | ENST00000562617 | 2109 nt | BASIC | 14.25 | □□□□□ -0.13 | | |
| MUC1 | P15941 | AC145285.3-201 | ENST00000564603 | 959 nt | BASIC | 14.25 | □□□□□ -0.13 | | |
| MUC1 | P15941 | AC084125.4-201 | ENST00000580385 | 338 nt | TSL 3 BASIC | 14.25 | □□□□□ -0.13 | | |
| MUC1 | P15941 | SLC9A3-AS1-204 | ENST00000606288 | 791 nt | TSL 2 BASIC | 14.25 | □□□□□ -0.13 | | |
| MUC1 | P15941 | ZEB1-AS1-209 | ENST00000607455 | 559 nt | TSL 4 BASIC | 14.25 | □□□□□ -0.13 | | |
| MUC1 | P15941 | Z83851.2-201 | ENST00000609564 | 659 nt | BASIC | 14.25 | □□□□□ -0.13 | | |
| MUC1 | P15941 | CLEC11A-203 | ENST00000617718 | 1128 nt | TSL 1 (best) BASIC | 14.25 | □□□□□ -0.13 | | |
| MUC1 | P15941 | HOXA11-AS1_5.1-201 | ENST00000620211 | 203 nt | BASIC | 14.25 | □□□□□ -0.13 | | |
| MUC1 | P15941 | FAM238C-204 | ENST00000640224 | 1268 nt | TSL 5 BASIC | 14.25 | □□□□□ -0.13 | | |
| MUC1 | P15941 | KCTD14-201 | ENST00000353172 | 1691 nt | APPRIS P3 TSL 1 (best) BASIC | 14.25 | □□□□□ -0.13 | | |
| MUC1 | P15941 | MBD1-222 | ENST00000590208 | 2913 nt | APPRIS ALT2 TSL 1 (best) BASIC | 14.25 | □□□□□ -0.13 | | |
| MUC1 | P15941 | AC068944.1-201 | ENST00000514855 | 1604 nt | TSL 2 BASIC | 14.25 | □□□□□ -0.13 | | |
| MUC1 | P15941 | LENG8-209 | ENST00000616932 | 2825 nt | APPRIS ALT2 TSL 5 BASIC | 14.25 | □□□□□ -0.13 | | |
| MUC1 | P15941 | ALDH3A2-225 | ENST00000630662 | 1558 nt | TSL 5 BASIC | 14.25 | □□□□□ -0.13 | | |
| MUC1 | P15941 | PARP16-201 | ENST00000261888 | 2731 nt | APPRIS P1 TSL 1 (best) BASIC | 14.25 | □□□□□ -0.13 | | |
| MUC1 | P15941 | C14orf93-205 | ENST00000397379 | 1949 nt | APPRIS P1 TSL 1 (best) BASIC | 14.25 | □□□□□ -0.13 | | |
| MUC1 | P15941 | UNC13A-205 | ENST00000551649 | 6052 nt | APPRIS ALT2 TSL 5 BASIC | 14.25 | □□□□□ -0.13 | | |
| MUC1 | P15941 | TRAF2-201 | ENST00000247668 | 2264 nt | APPRIS P1 TSL 1 (best) BASIC | 14.25 | □□□□□ -0.13 | | |
| MUC1 | P15941 | ZDHHC13-201 | ENST00000399351 | 2283 nt | TSL 1 (best) BASIC | 14.25 | □□□□□ -0.13 | | |
| MUC1 | P15941 | CFAP77-201 | ENST00000343036 | 1818 nt | APPRIS P3 TSL 2 BASIC | 14.25 | □□□□□ -0.13 | | |
| MUC1 | P15941 | PAQR6-204 | ENST00000356983 | 2143 nt | APPRIS ALT1 TSL 2 BASIC | 14.24 | □□□□□ -0.13 | | |
| MUC1 | P15941 | CTNNAL1-201 | ENST00000325551 | 2490 nt | APPRIS P3 TSL 1 (best) BASIC | 14.24 | □□□□□ -0.13 | | |
| MUC1 | P15941 | TRPV4-207 | ENST00000541794 | 2475 nt | TSL 1 (best) BASIC | 14.24 | □□□□□ -0.13 | | |
| MUC1 | P15941 | TMED7-TICAM2-201 | ENST00000282382 | 3491 nt | APPRIS P1 TSL 2 BASIC | 14.24 | □□□□□ -0.13 | | |
| MUC1 | P15941 | FAM104A-201 | ENST00000403627 | 2798 nt | APPRIS P1 TSL 1 (best) BASIC | 14.24 | □□□□□ -0.13 | | |
| MUC1 | P15941 | KRT84-201 | ENST00000257951 | 2092 nt | APPRIS P1 TSL 1 (best) BASIC | 14.24 | □□□□□ -0.13 | | |
| MUC1 | P15941 | LINC00323-202 | ENST00000441268 | 2095 nt | TSL 2 BASIC | 14.24 | □□□□□ -0.13 | | |
| MUC1 | P15941 | DUS3L-202 | ENST00000320699 | 1355 nt | APPRIS ALT2 TSL 1 (best) BASIC | 14.24 | □□□□□ -0.13 | | |
| MUC1 | P15941 | AC002310.6-201 | ENST00000624451 | 1377 nt | BASIC | 14.24 | □□□□□ -0.13 | | |
| MUC1 | P15941 | PDPK2P-201 | ENST00000382326 | 2387 nt | TSL 1 (best) BASIC | 14.24 | □□□□□ -0.13 | | |
| MUC1 | P15941 | CACFD1-201 | ENST00000291722 | 2688 nt | TSL 2 BASIC | 14.24 | □□□□□ -0.13 | | |
| MUC1 | P15941 | KNOP1-205 | ENST00000568230 | 1311 nt | APPRIS ALT2 TSL 5 BASIC | 14.24 | □□□□□ -0.13 | | |