Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.87□□□□□ -0.03
HLA-DOBP13765 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.87□□□□□ -0.03
HLA-DOBP13765 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DOBP13765 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DOBP13765 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DOBP13765 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
HLA-DOBP13765 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.87□□□□□ -0.03
HLA-DOBP13765 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.87□□□□□ -0.03
HLA-DOBP13765 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.87□□□□□ -0.03
HLA-DOBP13765 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.87□□□□□ -0.03
HLA-DOBP13765 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.87□□□□□ -0.03
HLA-DOBP13765 AL031432.2-201ENST00000566714 459 ntBASIC14.87□□□□□ -0.03
HLA-DOBP13765 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
HLA-DOBP13765 AL928711.1-201ENST00000570165 459 ntBASIC14.87□□□□□ -0.03
HLA-DOBP13765 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.87□□□□□ -0.03
HLA-DOBP13765 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.87□□□□□ -0.03
HLA-DOBP13765 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.87□□□□□ -0.03
HLA-DOBP13765 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DOBP13765 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DOBP13765 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
HLA-DOBP13765 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DOBP13765 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
HLA-DOBP13765 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DOBP13765 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DOBP13765 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DOBP13765 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
HLA-DOBP13765 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
HLA-DOBP13765 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.87□□□□□ -0.03
HLA-DOBP13765 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DOBP13765 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.87□□□□□ -0.03
HLA-DOBP13765 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.87□□□□□ -0.03
HLA-DOBP13765 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DOBP13765 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DOBP13765 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DOBP13765 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.87□□□□□ -0.03
HLA-DOBP13765 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DOBP13765 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.87□□□□□ -0.03
HLA-DOBP13765 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
HLA-DOBP13765 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DOBP13765 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.86□□□□□ -0.03
HLA-DOBP13765 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DOBP13765 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.86□□□□□ -0.03
HLA-DOBP13765 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DOBP13765 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.86□□□□□ -0.03
HLA-DOBP13765 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
HLA-DOBP13765 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DOBP13765 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.86□□□□□ -0.03
HLA-DOBP13765 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DOBP13765 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DOBP13765 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DOBP13765 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
HLA-DOBP13765 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.86□□□□□ -0.03
HLA-DOBP13765 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.86□□□□□ -0.03
HLA-DOBP13765 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DOBP13765 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
HLA-DOBP13765 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.86□□□□□ -0.03
HLA-DOBP13765 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.86□□□□□ -0.03
HLA-DOBP13765 RNU1-129P-201ENST00000384064 167 ntBASIC14.86□□□□□ -0.03
HLA-DOBP13765 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DOBP13765 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.86□□□□□ -0.03
HLA-DOBP13765 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.86□□□□□ -0.03
HLA-DOBP13765 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.86□□□□□ -0.03
HLA-DOBP13765 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.86□□□□□ -0.03
HLA-DOBP13765 U1.21-201ENST00000580816 167 ntBASIC14.86□□□□□ -0.03
HLA-DOBP13765 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.86□□□□□ -0.03
HLA-DOBP13765 AL645728.2-201ENST00000641974 660 ntBASIC14.86□□□□□ -0.03
HLA-DOBP13765 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DOBP13765 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
HLA-DOBP13765 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DOBP13765 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.86□□□□□ -0.03
HLA-DOBP13765 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DOBP13765 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DOBP13765 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DOBP13765 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
HLA-DOBP13765 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DOBP13765 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DOBP13765 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DOBP13765 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
HLA-DOBP13765 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DOBP13765 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.85□□□□□ -0.03
HLA-DOBP13765 PCGF3-213ENST00000620529 1899 ntBASIC14.85□□□□□ -0.03
HLA-DOBP13765 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.85□□□□□ -0.03
HLA-DOBP13765 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
HLA-DOBP13765 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.85□□□□□ -0.03
HLA-DOBP13765 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
HLA-DOBP13765 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DOBP13765 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DOBP13765 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.85□□□□□ -0.03
HLA-DOBP13765 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.85□□□□□ -0.03
HLA-DOBP13765 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DOBP13765 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DOBP13765 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.85□□□□□ -0.03
HLA-DOBP13765 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.85□□□□□ -0.03
HLA-DOBP13765 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.85□□□□□ -0.03
HLA-DOBP13765 AC106730.1-201ENST00000566722 1090 ntBASIC14.85□□□□□ -0.03
HLA-DOBP13765 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.85□□□□□ -0.03
HLA-DOBP13765 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DOBP13765 AC023141.13-201ENST00000604991 943 ntBASIC14.85□□□□□ -0.03
HLA-DOBP13765 AC004877.2-201ENST00000623941 599 ntBASIC14.85□□□□□ -0.03
HLA-DOBP13765 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms