Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CAPNS1P04632 GGTLC5P-201ENST00000617623 998 ntBASIC16.52■□□□□ 0.24
CAPNS1P04632 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.52■□□□□ 0.24
CAPNS1P04632 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CAPNS1P04632 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.52■□□□□ 0.23
CAPNS1P04632 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CAPNS1P04632 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CAPNS1P04632 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CAPNS1P04632 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CAPNS1P04632 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.52■□□□□ 0.23
CAPNS1P04632 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CAPNS1P04632 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CAPNS1P04632 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CAPNS1P04632 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CAPNS1P04632 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CAPNS1P04632 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CAPNS1P04632 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.51■□□□□ 0.23
CAPNS1P04632 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CAPNS1P04632 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CAPNS1P04632 AC092171.3-201ENST00000610122 2651 ntBASIC16.51■□□□□ 0.23
CAPNS1P04632 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CAPNS1P04632 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CAPNS1P04632 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CAPNS1P04632 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CAPNS1P04632 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CAPNS1P04632 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CAPNS1P04632 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CAPNS1P04632 AC245100.3-201ENST00000441281 285 ntBASIC16.51■□□□□ 0.23
CAPNS1P04632 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.51■□□□□ 0.23
CAPNS1P04632 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.51■□□□□ 0.23
CAPNS1P04632 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.51■□□□□ 0.23
CAPNS1P04632 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.51■□□□□ 0.23
CAPNS1P04632 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.51■□□□□ 0.23
CAPNS1P04632 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CAPNS1P04632 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.51■□□□□ 0.23
CAPNS1P04632 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.51■□□□□ 0.23
CAPNS1P04632 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CAPNS1P04632 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.51■□□□□ 0.23
CAPNS1P04632 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CAPNS1P04632 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CAPNS1P04632 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CAPNS1P04632 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CAPNS1P04632 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CAPNS1P04632 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CAPNS1P04632 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CAPNS1P04632 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CAPNS1P04632 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
CAPNS1P04632 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CAPNS1P04632 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CAPNS1P04632 AC092919.2-201ENST00000623631 1645 ntBASIC16.51■□□□□ 0.23
CAPNS1P04632 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CAPNS1P04632 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CAPNS1P04632 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.51■□□□□ 0.23
CAPNS1P04632 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.51■□□□□ 0.23
CAPNS1P04632 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CAPNS1P04632 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CAPNS1P04632 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.51■□□□□ 0.23
CAPNS1P04632 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.51■□□□□ 0.23
CAPNS1P04632 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.51■□□□□ 0.23
CAPNS1P04632 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CAPNS1P04632 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CAPNS1P04632 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CAPNS1P04632 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.51■□□□□ 0.23
CAPNS1P04632 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CAPNS1P04632 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CAPNS1P04632 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CAPNS1P04632 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CAPNS1P04632 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CAPNS1P04632 AC008741.2-201ENST00000612792 3115 ntBASIC16.5■□□□□ 0.23
CAPNS1P04632 TUBB3P1-201ENST00000405796 1332 ntBASIC16.5■□□□□ 0.23
CAPNS1P04632 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CAPNS1P04632 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.5■□□□□ 0.23
CAPNS1P04632 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CAPNS1P04632 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CAPNS1P04632 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CAPNS1P04632 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.5■□□□□ 0.23
CAPNS1P04632 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.5■□□□□ 0.23
CAPNS1P04632 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.5■□□□□ 0.23
CAPNS1P04632 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.5■□□□□ 0.23
CAPNS1P04632 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.5■□□□□ 0.23
CAPNS1P04632 AL596325.1-201ENST00000563991 1082 ntBASIC16.5■□□□□ 0.23
CAPNS1P04632 SPDYE22P-201ENST00000582158 798 ntBASIC16.5■□□□□ 0.23
CAPNS1P04632 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.5■□□□□ 0.23
CAPNS1P04632 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.5■□□□□ 0.23
CAPNS1P04632 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.5■□□□□ 0.23
CAPNS1P04632 AC025048.6-201ENST00000634326 1161 ntBASIC16.5■□□□□ 0.23
CAPNS1P04632 AL358472.5-202ENST00000641448 1267 ntBASIC16.5■□□□□ 0.23
CAPNS1P04632 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CAPNS1P04632 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CAPNS1P04632 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.5■□□□□ 0.23
CAPNS1P04632 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CAPNS1P04632 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CAPNS1P04632 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CAPNS1P04632 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CAPNS1P04632 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.5■□□□□ 0.23
CAPNS1P04632 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.5■□□□□ 0.23
CAPNS1P04632 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.5■□□□□ 0.23
CAPNS1P04632 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
CAPNS1P04632 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CAPNS1P04632 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms