Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC12.66□□□□□ -0.38
TCRAP04437 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC12.66□□□□□ -0.38
TCRAP04437 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC12.66□□□□□ -0.38
TCRAP04437 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC12.66□□□□□ -0.38
TCRAP04437 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC12.66□□□□□ -0.38
TCRAP04437 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC12.66□□□□□ -0.38
TCRAP04437 AP000867.4-201ENST00000641616 219 ntBASIC12.66□□□□□ -0.38
TCRAP04437 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC12.66□□□□□ -0.38
TCRAP04437 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TCRAP04437 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TCRAP04437 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
TCRAP04437 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC12.66□□□□□ -0.38
TCRAP04437 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC12.66□□□□□ -0.38
TCRAP04437 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
TCRAP04437 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
TCRAP04437 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TCRAP04437 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
TCRAP04437 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TCRAP04437 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TCRAP04437 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TCRAP04437 REXO1L8P-201ENST00000604378 1897 ntBASIC12.65□□□□□ -0.38
TCRAP04437 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TCRAP04437 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TCRAP04437 LINC02447-202ENST00000501888 2146 ntBASIC12.65□□□□□ -0.38
TCRAP04437 CDC14C-201ENST00000428251 1719 ntBASIC12.65□□□□□ -0.38
TCRAP04437 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC12.65□□□□□ -0.38
TCRAP04437 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TCRAP04437 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC12.65□□□□□ -0.38
TCRAP04437 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC12.65□□□□□ -0.38
TCRAP04437 ACE-203ENST00000413513 2237 ntTSL 2 BASIC12.65□□□□□ -0.38
TCRAP04437 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
TCRAP04437 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC12.65□□□□□ -0.38
TCRAP04437 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TCRAP04437 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
TCRAP04437 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TCRAP04437 KRT8P39-201ENST00000396270 1433 ntBASIC12.65□□□□□ -0.38
TCRAP04437 SIGLEC16-201ENST00000599858 1437 ntBASIC12.65□□□□□ -0.38
TCRAP04437 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TCRAP04437 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TCRAP04437 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TCRAP04437 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
TCRAP04437 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TCRAP04437 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TCRAP04437 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TCRAP04437 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TCRAP04437 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
TCRAP04437 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TCRAP04437 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TCRAP04437 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TCRAP04437 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC12.65□□□□□ -0.38
TCRAP04437 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TCRAP04437 AC005521.1-201ENST00000393351 872 ntBASIC12.65□□□□□ -0.38
TCRAP04437 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TCRAP04437 AL596275.1-201ENST00000423464 877 ntBASIC12.65□□□□□ -0.38
TCRAP04437 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
TCRAP04437 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TCRAP04437 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC12.65□□□□□ -0.38
TCRAP04437 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TCRAP04437 AP005901.3-202ENST00000581653 237 ntBASIC12.65□□□□□ -0.38
TCRAP04437 COPE-211ENST00000600932 1144 ntTSL 5 BASIC12.65□□□□□ -0.38
TCRAP04437 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC12.65□□□□□ -0.38
TCRAP04437 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
TCRAP04437 AL590326.2-201ENST00000625139 305 ntBASIC12.65□□□□□ -0.38
TCRAP04437 AC133561.5-201ENST00000635547 218 ntBASIC12.65□□□□□ -0.38
TCRAP04437 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC12.65□□□□□ -0.38
TCRAP04437 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TCRAP04437 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
TCRAP04437 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC12.65□□□□□ -0.38
TCRAP04437 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC12.65□□□□□ -0.38
TCRAP04437 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TCRAP04437 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TCRAP04437 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
TCRAP04437 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TCRAP04437 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
TCRAP04437 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TCRAP04437 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TCRAP04437 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TCRAP04437 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TCRAP04437 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
TCRAP04437 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC12.65□□□□□ -0.38
TCRAP04437 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
TCRAP04437 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TCRAP04437 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TCRAP04437 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
TCRAP04437 LINC01144-201ENST00000626198 1710 ntBASIC12.65□□□□□ -0.38
TCRAP04437 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TCRAP04437 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TCRAP04437 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TCRAP04437 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC12.65□□□□□ -0.38
TCRAP04437 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
TCRAP04437 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
TCRAP04437 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
TCRAP04437 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
TCRAP04437 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
TCRAP04437 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
TCRAP04437 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC12.65□□□□□ -0.39
TCRAP04437 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TCRAP04437 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TCRAP04437 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TCRAP04437 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms