Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC13.96□□□□□ -0.17
CD74P04233 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CD74P04233 TMBIM7P-203ENST00000641617 1718 ntBASIC13.96□□□□□ -0.17
CD74P04233 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CD74P04233 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC13.96□□□□□ -0.17
CD74P04233 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CD74P04233 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC13.96□□□□□ -0.17
CD74P04233 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC13.96□□□□□ -0.17
CD74P04233 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC13.96□□□□□ -0.17
CD74P04233 S100A2-206ENST00000497140 697 ntTSL 2 BASIC13.96□□□□□ -0.17
CD74P04233 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC13.96□□□□□ -0.17
CD74P04233 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC13.96□□□□□ -0.17
CD74P04233 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CD74P04233 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CD74P04233 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CD74P04233 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.96□□□□□ -0.17
CD74P04233 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.96□□□□□ -0.17
CD74P04233 AC092919.2-201ENST00000623631 1645 ntBASIC13.96□□□□□ -0.17
CD74P04233 SIGLEC16-201ENST00000599858 1437 ntBASIC13.96□□□□□ -0.18
CD74P04233 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.96□□□□□ -0.18
CD74P04233 F11R-206ENST00000621309 4770 ntTSL 5 BASIC13.96□□□□□ -0.18
CD74P04233 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
CD74P04233 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CD74P04233 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CD74P04233 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC13.96□□□□□ -0.18
CD74P04233 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.18
CD74P04233 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.96□□□□□ -0.18
CD74P04233 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
CD74P04233 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CD74P04233 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC13.96□□□□□ -0.18
CD74P04233 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CD74P04233 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
CD74P04233 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC13.95□□□□□ -0.18
CD74P04233 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
CD74P04233 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CD74P04233 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD74P04233 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CD74P04233 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD74P04233 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CD74P04233 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD74P04233 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD74P04233 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD74P04233 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD74P04233 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD74P04233 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD74P04233 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD74P04233 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD74P04233 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD74P04233 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD74P04233 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD74P04233 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CD74P04233 TSPY5P-201ENST00000426936 936 ntBASIC13.95□□□□□ -0.18
CD74P04233 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC13.95□□□□□ -0.18
CD74P04233 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC13.95□□□□□ -0.18
CD74P04233 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC13.95□□□□□ -0.18
CD74P04233 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC13.95□□□□□ -0.18
CD74P04233 AP000867.4-201ENST00000641616 219 ntBASIC13.95□□□□□ -0.18
CD74P04233 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.95□□□□□ -0.18
CD74P04233 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.95□□□□□ -0.18
CD74P04233 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CD74P04233 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD74P04233 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD74P04233 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC13.95□□□□□ -0.18
CD74P04233 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD74P04233 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD74P04233 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD74P04233 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD74P04233 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD74P04233 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.95□□□□□ -0.18
CD74P04233 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CD74P04233 ACE-204ENST00000428043 5120 ntTSL 2 BASIC13.95□□□□□ -0.18
CD74P04233 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.95□□□□□ -0.18
CD74P04233 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD74P04233 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CD74P04233 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CD74P04233 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CD74P04233 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD74P04233 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CD74P04233 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD74P04233 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD74P04233 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.94□□□□□ -0.18
CD74P04233 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD74P04233 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD74P04233 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
CD74P04233 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CD74P04233 TP73-AS1-210ENST00000637775 1455 ntBASIC13.94□□□□□ -0.18
CD74P04233 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.94□□□□□ -0.18
CD74P04233 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CD74P04233 INTS4P1-201ENST00000438455 1935 ntBASIC13.94□□□□□ -0.18
CD74P04233 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.94□□□□□ -0.18
CD74P04233 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CD74P04233 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD74P04233 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD74P04233 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD74P04233 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD74P04233 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
CD74P04233 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD74P04233 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CD74P04233 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CD74P04233 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms