Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
OPN1SWP03999 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.53■□□□□ 0.08
OPN1SWP03999 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.53■□□□□ 0.08
OPN1SWP03999 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
OPN1SWP03999 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
OPN1SWP03999 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.53■□□□□ 0.08
OPN1SWP03999 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
OPN1SWP03999 ARMC10P1-201ENST00000313754 855 ntBASIC15.53■□□□□ 0.08
OPN1SWP03999 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
OPN1SWP03999 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
OPN1SWP03999 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
OPN1SWP03999 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
OPN1SWP03999 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.53■□□□□ 0.08
OPN1SWP03999 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.53■□□□□ 0.08
OPN1SWP03999 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.53■□□□□ 0.08
OPN1SWP03999 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC15.53■□□□□ 0.08
OPN1SWP03999 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
OPN1SWP03999 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
OPN1SWP03999 AC139887.3-201ENST00000568585 713 ntBASIC15.53■□□□□ 0.08
OPN1SWP03999 MTDHP4-201ENST00000600287 670 ntBASIC15.53■□□□□ 0.08
OPN1SWP03999 AL445228.2-201ENST00000605589 952 ntBASIC15.53■□□□□ 0.08
OPN1SWP03999 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
OPN1SWP03999 REXO1L3P-201ENST00000622202 1288 ntBASIC15.53■□□□□ 0.08
OPN1SWP03999 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
OPN1SWP03999 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
OPN1SWP03999 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
OPN1SWP03999 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
OPN1SWP03999 AC011270.2-201ENST00000624293 2550 ntBASIC15.53■□□□□ 0.08
OPN1SWP03999 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
OPN1SWP03999 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.53■□□□□ 0.08
OPN1SWP03999 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
OPN1SWP03999 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
OPN1SWP03999 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
OPN1SWP03999 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
OPN1SWP03999 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
OPN1SWP03999 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
OPN1SWP03999 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
OPN1SWP03999 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
OPN1SWP03999 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
OPN1SWP03999 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
OPN1SWP03999 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.52■□□□□ 0.08
OPN1SWP03999 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
OPN1SWP03999 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
OPN1SWP03999 KRT8P39-201ENST00000396270 1433 ntBASIC15.52■□□□□ 0.08
OPN1SWP03999 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.52■□□□□ 0.08
OPN1SWP03999 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.52■□□□□ 0.08
OPN1SWP03999 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
OPN1SWP03999 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.52■□□□□ 0.08
OPN1SWP03999 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
OPN1SWP03999 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.52■□□□□ 0.08
OPN1SWP03999 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
OPN1SWP03999 AL603832.2-201ENST00000566195 2125 ntBASIC15.52■□□□□ 0.08
OPN1SWP03999 AC131009.4-201ENST00000624048 1740 ntBASIC15.52■□□□□ 0.08
OPN1SWP03999 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
OPN1SWP03999 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.52■□□□□ 0.08
OPN1SWP03999 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
OPN1SWP03999 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.52■□□□□ 0.08
OPN1SWP03999 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
OPN1SWP03999 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
OPN1SWP03999 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
OPN1SWP03999 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
OPN1SWP03999 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
OPN1SWP03999 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
OPN1SWP03999 ELK2BP-201ENST00000415014 1224 ntBASIC15.52■□□□□ 0.08
OPN1SWP03999 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
OPN1SWP03999 SLC25A6P2-201ENST00000497974 877 ntBASIC15.52■□□□□ 0.08
OPN1SWP03999 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
OPN1SWP03999 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
OPN1SWP03999 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.52■□□□□ 0.08
OPN1SWP03999 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.52■□□□□ 0.08
OPN1SWP03999 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.52■□□□□ 0.08
OPN1SWP03999 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.52■□□□□ 0.08
OPN1SWP03999 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.52■□□□□ 0.08
OPN1SWP03999 AC004706.3-202ENST00000621574 984 ntBASIC15.52■□□□□ 0.08
OPN1SWP03999 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC15.52■□□□□ 0.08
OPN1SWP03999 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.52■□□□□ 0.08
OPN1SWP03999 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
OPN1SWP03999 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
OPN1SWP03999 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
OPN1SWP03999 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
OPN1SWP03999 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
OPN1SWP03999 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
OPN1SWP03999 REXO1L8P-201ENST00000604378 1897 ntBASIC15.52■□□□□ 0.07
OPN1SWP03999 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.52■□□□□ 0.07
OPN1SWP03999 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.52■□□□□ 0.07
OPN1SWP03999 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
OPN1SWP03999 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
OPN1SWP03999 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
OPN1SWP03999 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
OPN1SWP03999 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
OPN1SWP03999 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
OPN1SWP03999 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
OPN1SWP03999 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
OPN1SWP03999 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
OPN1SWP03999 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
OPN1SWP03999 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.51■□□□□ 0.07
OPN1SWP03999 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
OPN1SWP03999 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
OPN1SWP03999 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.51■□□□□ 0.07
OPN1SWP03999 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 193.8 ms