Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DRAP01903 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.78■□□□□ 0.44
HLA-DRAP01903 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DRAP01903 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DRAP01903 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.78■□□□□ 0.44
HLA-DRAP01903 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.78■□□□□ 0.44
HLA-DRAP01903 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.78■□□□□ 0.44
HLA-DRAP01903 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DRAP01903 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.78■□□□□ 0.44
HLA-DRAP01903 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DRAP01903 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.78■□□□□ 0.44
HLA-DRAP01903 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.78■□□□□ 0.44
HLA-DRAP01903 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
HLA-DRAP01903 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DRAP01903 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.78■□□□□ 0.44
HLA-DRAP01903 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.78■□□□□ 0.44
HLA-DRAP01903 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.78■□□□□ 0.44
HLA-DRAP01903 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DRAP01903 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DRAP01903 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.78■□□□□ 0.44
HLA-DRAP01903 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DRAP01903 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DRAP01903 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DRAP01903 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HLA-DRAP01903 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
HLA-DRAP01903 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
HLA-DRAP01903 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.77■□□□□ 0.44
HLA-DRAP01903 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
HLA-DRAP01903 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.77■□□□□ 0.44
HLA-DRAP01903 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.77■□□□□ 0.44
HLA-DRAP01903 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HLA-DRAP01903 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HLA-DRAP01903 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HLA-DRAP01903 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
HLA-DRAP01903 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
HLA-DRAP01903 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HLA-DRAP01903 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HLA-DRAP01903 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.77■□□□□ 0.44
HLA-DRAP01903 TFAMP1-201ENST00000412727 736 ntBASIC17.77■□□□□ 0.44
HLA-DRAP01903 POU5F1P6-201ENST00000466990 990 ntBASIC17.77■□□□□ 0.44
HLA-DRAP01903 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.77■□□□□ 0.44
HLA-DRAP01903 AL135744.1-201ENST00000565098 629 ntBASIC17.77■□□□□ 0.44
HLA-DRAP01903 AC005829.1-201ENST00000570002 483 ntBASIC17.77■□□□□ 0.44
HLA-DRAP01903 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
HLA-DRAP01903 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.77■□□□□ 0.44
HLA-DRAP01903 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HLA-DRAP01903 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
HLA-DRAP01903 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HLA-DRAP01903 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
HLA-DRAP01903 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
HLA-DRAP01903 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HLA-DRAP01903 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HLA-DRAP01903 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
HLA-DRAP01903 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
HLA-DRAP01903 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
HLA-DRAP01903 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
HLA-DRAP01903 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HLA-DRAP01903 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.77■□□□□ 0.43
HLA-DRAP01903 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
HLA-DRAP01903 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.77■□□□□ 0.43
HLA-DRAP01903 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
HLA-DRAP01903 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.77■□□□□ 0.43
HLA-DRAP01903 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
HLA-DRAP01903 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HLA-DRAP01903 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HLA-DRAP01903 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.76■□□□□ 0.43
HLA-DRAP01903 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
HLA-DRAP01903 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.76■□□□□ 0.43
HLA-DRAP01903 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.76■□□□□ 0.43
HLA-DRAP01903 AKAP8P1-201ENST00000434743 1349 ntBASIC17.76■□□□□ 0.43
HLA-DRAP01903 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DRAP01903 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DRAP01903 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
HLA-DRAP01903 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
HLA-DRAP01903 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DRAP01903 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.76■□□□□ 0.43
HLA-DRAP01903 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DRAP01903 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DRAP01903 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DRAP01903 AC005622.1-201ENST00000636801 1703 ntBASIC17.76■□□□□ 0.43
HLA-DRAP01903 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.76■□□□□ 0.43
HLA-DRAP01903 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.76■□□□□ 0.43
HLA-DRAP01903 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DRAP01903 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DRAP01903 RPSAP43-201ENST00000402237 625 ntBASIC17.76■□□□□ 0.43
HLA-DRAP01903 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DRAP01903 GPX1P2-201ENST00000429271 606 ntBASIC17.76■□□□□ 0.43
HLA-DRAP01903 AC112482.1-201ENST00000492080 688 ntBASIC17.76■□□□□ 0.43
HLA-DRAP01903 AC092865.5-201ENST00000545435 363 ntBASIC17.76■□□□□ 0.43
HLA-DRAP01903 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DRAP01903 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DRAP01903 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DRAP01903 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DRAP01903 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.76■□□□□ 0.43
HLA-DRAP01903 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DRAP01903 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DRAP01903 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
HLA-DRAP01903 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DRAP01903 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DRAP01903 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms