Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CD4P01730 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CD4P01730 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CD4P01730 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC18.2■□□□□ 0.5
CD4P01730 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CD4P01730 MXI1-205ENST00000393134 889 ntTSL 2 BASIC18.2■□□□□ 0.5
CD4P01730 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
CD4P01730 RNA5SP410-201ENST00000516285 106 ntBASIC18.2■□□□□ 0.5
CD4P01730 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC18.2■□□□□ 0.5
CD4P01730 AL512361.1-201ENST00000554200 418 ntBASIC18.2■□□□□ 0.5
CD4P01730 WASH4P-201ENST00000564273 1246 ntBASIC18.2■□□□□ 0.5
CD4P01730 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC18.2■□□□□ 0.5
CD4P01730 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.2■□□□□ 0.5
CD4P01730 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.2■□□□□ 0.5
CD4P01730 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.2■□□□□ 0.5
CD4P01730 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CD4P01730 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC18.2■□□□□ 0.5
CD4P01730 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC18.2■□□□□ 0.5
CD4P01730 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.2■□□□□ 0.5
CD4P01730 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CD4P01730 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CD4P01730 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CD4P01730 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC18.2■□□□□ 0.5
CD4P01730 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CD4P01730 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CD4P01730 AC092053.1-201ENST00000605787 1936 ntBASIC18.19■□□□□ 0.5
CD4P01730 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.19■□□□□ 0.5
CD4P01730 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CD4P01730 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CD4P01730 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.19■□□□□ 0.5
CD4P01730 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.19■□□□□ 0.5
CD4P01730 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CD4P01730 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CD4P01730 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.19■□□□□ 0.5
CD4P01730 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CD4P01730 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.19■□□□□ 0.5
CD4P01730 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CD4P01730 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CD4P01730 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CD4P01730 SPDYE19P-201ENST00000338590 713 ntBASIC18.19■□□□□ 0.5
CD4P01730 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CD4P01730 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.19■□□□□ 0.5
CD4P01730 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC18.19■□□□□ 0.5
CD4P01730 RPS2P32-201ENST00000439199 892 ntBASIC18.19■□□□□ 0.5
CD4P01730 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.19■□□□□ 0.5
CD4P01730 AC093004.1-201ENST00000508850 424 ntBASIC18.19■□□□□ 0.5
CD4P01730 DOC2GP-202ENST00000514950 1163 ntBASIC18.19■□□□□ 0.5
CD4P01730 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CD4P01730 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.19■□□□□ 0.5
CD4P01730 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.19■□□□□ 0.5
CD4P01730 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC18.19■□□□□ 0.5
CD4P01730 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC18.19■□□□□ 0.5
CD4P01730 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CD4P01730 AC008494.3-201ENST00000606615 944 ntBASIC18.19■□□□□ 0.5
CD4P01730 FHL2-212ENST00000607522 759 ntTSL 2 BASIC18.19■□□□□ 0.5
CD4P01730 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CD4P01730 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.19■□□□□ 0.5
CD4P01730 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CD4P01730 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
CD4P01730 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CD4P01730 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CD4P01730 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CD4P01730 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CD4P01730 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CD4P01730 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.18■□□□□ 0.5
CD4P01730 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CD4P01730 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CD4P01730 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CD4P01730 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CD4P01730 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.18■□□□□ 0.5
CD4P01730 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CD4P01730 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.18■□□□□ 0.5
CD4P01730 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CD4P01730 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CD4P01730 RPS19-201ENST00000221975 500 ntTSL 3 BASIC18.18■□□□□ 0.5
CD4P01730 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CD4P01730 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CD4P01730 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CD4P01730 RBM39-205ENST00000397370 612 ntTSL 2 BASIC18.18■□□□□ 0.5
CD4P01730 MIR1909-201ENST00000411312 80 ntBASIC18.18■□□□□ 0.5
CD4P01730 AC112492.5-201ENST00000421897 457 ntBASIC18.18■□□□□ 0.5
CD4P01730 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CD4P01730 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18.18■□□□□ 0.5
CD4P01730 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CD4P01730 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CD4P01730 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC18.18■□□□□ 0.5
CD4P01730 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CD4P01730 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC18.18■□□□□ 0.5
CD4P01730 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC18.18■□□□□ 0.5
CD4P01730 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC18.18■□□□□ 0.5
CD4P01730 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC18.18■□□□□ 0.5
CD4P01730 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC18.18■□□□□ 0.5
CD4P01730 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
CD4P01730 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
CD4P01730 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.18■□□□□ 0.5
CD4P01730 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CD4P01730 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CD4P01730 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CD4P01730 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CD4P01730 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms