Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
ZBED1O96006 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.52■□□□□ 0.4
ZBED1O96006 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
ZBED1O96006 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
ZBED1O96006 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ZBED1O96006 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.52■□□□□ 0.4
ZBED1O96006 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.52■□□□□ 0.4
ZBED1O96006 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.52■□□□□ 0.4
ZBED1O96006 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.52■□□□□ 0.4
ZBED1O96006 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ZBED1O96006 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ZBED1O96006 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
ZBED1O96006 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
ZBED1O96006 AC092171.3-201ENST00000610122 2651 ntBASIC17.52■□□□□ 0.4
ZBED1O96006 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
ZBED1O96006 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.52■□□□□ 0.4
ZBED1O96006 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ZBED1O96006 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.52■□□□□ 0.4
ZBED1O96006 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.52■□□□□ 0.4
ZBED1O96006 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
ZBED1O96006 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.52■□□□□ 0.4
ZBED1O96006 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.52■□□□□ 0.4
ZBED1O96006 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.52■□□□□ 0.4
ZBED1O96006 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.52■□□□□ 0.4
ZBED1O96006 AC006538.3-201ENST00000612495 578 ntBASIC17.52■□□□□ 0.4
ZBED1O96006 AC139530.3-201ENST00000620344 690 ntBASIC17.52■□□□□ 0.4
ZBED1O96006 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
ZBED1O96006 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ZBED1O96006 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
ZBED1O96006 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ZBED1O96006 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
ZBED1O96006 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ZBED1O96006 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ZBED1O96006 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.52■□□□□ 0.39
ZBED1O96006 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.52■□□□□ 0.39
ZBED1O96006 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ZBED1O96006 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
ZBED1O96006 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
ZBED1O96006 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
ZBED1O96006 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.52■□□□□ 0.39
ZBED1O96006 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ZBED1O96006 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ZBED1O96006 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.51■□□□□ 0.39
ZBED1O96006 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.51■□□□□ 0.39
ZBED1O96006 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ZBED1O96006 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.51■□□□□ 0.39
ZBED1O96006 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
ZBED1O96006 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
ZBED1O96006 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.51■□□□□ 0.39
ZBED1O96006 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
ZBED1O96006 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ZBED1O96006 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ZBED1O96006 AC211486.1-202ENST00000416371 468 ntBASIC17.51■□□□□ 0.39
ZBED1O96006 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
ZBED1O96006 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.51■□□□□ 0.39
ZBED1O96006 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.51■□□□□ 0.39
ZBED1O96006 AC211476.1-201ENST00000503899 468 ntBASIC17.51■□□□□ 0.39
ZBED1O96006 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.51■□□□□ 0.39
ZBED1O96006 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.51■□□□□ 0.39
ZBED1O96006 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.51■□□□□ 0.39
ZBED1O96006 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.51■□□□□ 0.39
ZBED1O96006 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
ZBED1O96006 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.51■□□□□ 0.39
ZBED1O96006 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.51■□□□□ 0.39
ZBED1O96006 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
ZBED1O96006 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ZBED1O96006 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ZBED1O96006 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ZBED1O96006 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
ZBED1O96006 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ZBED1O96006 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
ZBED1O96006 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.51■□□□□ 0.39
ZBED1O96006 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ZBED1O96006 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZBED1O96006 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZBED1O96006 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.5■□□□□ 0.39
ZBED1O96006 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZBED1O96006 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZBED1O96006 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZBED1O96006 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
ZBED1O96006 AC046158.3-201ENST00000624947 2558 ntBASIC17.5■□□□□ 0.39
ZBED1O96006 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZBED1O96006 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.5■□□□□ 0.39
ZBED1O96006 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZBED1O96006 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZBED1O96006 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZBED1O96006 AC079328.2-201ENST00000561241 3354 ntBASIC17.5■□□□□ 0.39
ZBED1O96006 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.5■□□□□ 0.39
ZBED1O96006 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
ZBED1O96006 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZBED1O96006 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZBED1O96006 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.5■□□□□ 0.39
ZBED1O96006 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ZBED1O96006 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ZBED1O96006 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZBED1O96006 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZBED1O96006 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ZBED1O96006 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
ZBED1O96006 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.5■□□□□ 0.39
ZBED1O96006 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms