Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
GGPS1O95749 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
GGPS1O95749 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
GGPS1O95749 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.53■□□□□ 0.56
GGPS1O95749 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GGPS1O95749 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GGPS1O95749 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
GGPS1O95749 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GGPS1O95749 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
GGPS1O95749 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GGPS1O95749 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GGPS1O95749 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GGPS1O95749 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GGPS1O95749 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
GGPS1O95749 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
GGPS1O95749 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC18.53■□□□□ 0.56
GGPS1O95749 AC027369.6-201ENST00000525520 931 ntBASIC18.53■□□□□ 0.56
GGPS1O95749 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC18.53■□□□□ 0.56
GGPS1O95749 RN7SL204P-201ENST00000582831 262 ntBASIC18.53■□□□□ 0.56
GGPS1O95749 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.53■□□□□ 0.56
GGPS1O95749 SPDYE12P-201ENST00000618416 771 ntBASIC18.53■□□□□ 0.56
GGPS1O95749 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
GGPS1O95749 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GGPS1O95749 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GGPS1O95749 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
GGPS1O95749 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.53■□□□□ 0.56
GGPS1O95749 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
GGPS1O95749 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
GGPS1O95749 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
GGPS1O95749 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.53■□□□□ 0.56
GGPS1O95749 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
GGPS1O95749 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
GGPS1O95749 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.52■□□□□ 0.56
GGPS1O95749 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
GGPS1O95749 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
GGPS1O95749 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.52■□□□□ 0.56
GGPS1O95749 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.52■□□□□ 0.56
GGPS1O95749 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
GGPS1O95749 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
GGPS1O95749 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
GGPS1O95749 AC124067.4-201ENST00000519691 2379 ntBASIC18.52■□□□□ 0.56
GGPS1O95749 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
GGPS1O95749 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.52■□□□□ 0.56
GGPS1O95749 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
GGPS1O95749 RAC2-204ENST00000406508 893 ntTSL 5 BASIC18.52■□□□□ 0.56
GGPS1O95749 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.52■□□□□ 0.56
GGPS1O95749 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC18.52■□□□□ 0.56
GGPS1O95749 AC241585.1-201ENST00000433527 519 ntBASIC18.52■□□□□ 0.56
GGPS1O95749 AC002472.2-201ENST00000442739 958 ntBASIC18.52■□□□□ 0.56
GGPS1O95749 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
GGPS1O95749 AC098859.1-201ENST00000502915 1238 ntBASIC18.52■□□□□ 0.56
GGPS1O95749 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC18.52■□□□□ 0.56
GGPS1O95749 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.52■□□□□ 0.56
GGPS1O95749 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.52■□□□□ 0.56
GGPS1O95749 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
GGPS1O95749 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
GGPS1O95749 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
GGPS1O95749 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
GGPS1O95749 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
GGPS1O95749 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
GGPS1O95749 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
GGPS1O95749 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
GGPS1O95749 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
GGPS1O95749 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
GGPS1O95749 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.52■□□□□ 0.55
GGPS1O95749 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
GGPS1O95749 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GGPS1O95749 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GGPS1O95749 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
GGPS1O95749 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.51■□□□□ 0.55
GGPS1O95749 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.51■□□□□ 0.55
GGPS1O95749 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
GGPS1O95749 AC011676.5-201ENST00000624864 2660 ntBASIC18.51■□□□□ 0.55
GGPS1O95749 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GGPS1O95749 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GGPS1O95749 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
GGPS1O95749 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.51■□□□□ 0.55
GGPS1O95749 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
GGPS1O95749 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
GGPS1O95749 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
GGPS1O95749 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.51■□□□□ 0.55
GGPS1O95749 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.51■□□□□ 0.55
GGPS1O95749 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.51■□□□□ 0.55
GGPS1O95749 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
GGPS1O95749 OARD1-208ENST00000469104 704 ntTSL 2 BASIC18.51■□□□□ 0.55
GGPS1O95749 SATB1-217ENST00000493952 626 ntTSL 3 BASIC18.51■□□□□ 0.55
GGPS1O95749 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
GGPS1O95749 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.51■□□□□ 0.55
GGPS1O95749 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC18.51■□□□□ 0.55
GGPS1O95749 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC18.51■□□□□ 0.55
GGPS1O95749 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.51■□□□□ 0.55
GGPS1O95749 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.51■□□□□ 0.55
GGPS1O95749 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
GGPS1O95749 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
GGPS1O95749 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
GGPS1O95749 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
GGPS1O95749 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.51■□□□□ 0.55
GGPS1O95749 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
GGPS1O95749 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GGPS1O95749 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms