Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC21.56■■□□□ 1.04
LTN1O94822 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
LTN1O94822 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC21.56■■□□□ 1.04
LTN1O94822 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
LTN1O94822 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
LTN1O94822 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LTN1O94822 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LTN1O94822 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LTN1O94822 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LTN1O94822 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LTN1O94822 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LTN1O94822 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
LTN1O94822 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LTN1O94822 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LTN1O94822 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
LTN1O94822 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
LTN1O94822 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
LTN1O94822 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LTN1O94822 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LTN1O94822 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC21.55■■□□□ 1.04
LTN1O94822 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LTN1O94822 AL162726.2-201ENST00000438986 1017 ntBASIC21.55■■□□□ 1.04
LTN1O94822 TARDBPP1-201ENST00000442013 1203 ntBASIC21.55■■□□□ 1.04
LTN1O94822 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC21.55■■□□□ 1.04
LTN1O94822 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
LTN1O94822 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC21.55■■□□□ 1.04
LTN1O94822 AP005482.1-201ENST00000563722 1273 ntBASIC21.55■■□□□ 1.04
LTN1O94822 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC21.55■■□□□ 1.04
LTN1O94822 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC21.55■■□□□ 1.04
LTN1O94822 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LTN1O94822 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LTN1O94822 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC21.55■■□□□ 1.04
LTN1O94822 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
LTN1O94822 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC21.55■■□□□ 1.04
LTN1O94822 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.55■■□□□ 1.04
LTN1O94822 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC21.55■■□□□ 1.04
LTN1O94822 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC21.55■■□□□ 1.04
LTN1O94822 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LTN1O94822 KRT8P37-201ENST00000451609 1420 ntBASIC21.54■■□□□ 1.04
LTN1O94822 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LTN1O94822 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
LTN1O94822 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LTN1O94822 LETM1P2-201ENST00000597330 2178 ntBASIC21.54■■□□□ 1.04
LTN1O94822 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LTN1O94822 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC21.54■■□□□ 1.04
LTN1O94822 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC21.54■■□□□ 1.04
LTN1O94822 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC21.54■■□□□ 1.04
LTN1O94822 AL512343.1-201ENST00000605837 169 ntBASIC21.54■■□□□ 1.04
LTN1O94822 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LTN1O94822 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LTN1O94822 AL592424.1-201ENST00000563624 1536 ntBASIC21.54■■□□□ 1.04
LTN1O94822 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LTN1O94822 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
LTN1O94822 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LTN1O94822 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LTN1O94822 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LTN1O94822 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC21.54■■□□□ 1.04
LTN1O94822 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC21.54■■□□□ 1.04
LTN1O94822 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LTN1O94822 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
LTN1O94822 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
LTN1O94822 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC21.54■■□□□ 1.04
LTN1O94822 MEP1AP4-201ENST00000423244 1087 ntBASIC21.53■■□□□ 1.04
LTN1O94822 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC21.53■■□□□ 1.04
LTN1O94822 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC21.53■■□□□ 1.04
LTN1O94822 NEU3-203ENST00000529024 581 ntTSL 3 BASIC21.53■■□□□ 1.04
LTN1O94822 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
LTN1O94822 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC21.53■■□□□ 1.04
LTN1O94822 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC21.53■■□□□ 1.04
LTN1O94822 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
LTN1O94822 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
LTN1O94822 CDC14C-201ENST00000428251 1719 ntBASIC21.53■■□□□ 1.04
LTN1O94822 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LTN1O94822 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
LTN1O94822 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
LTN1O94822 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC21.53■■□□□ 1.04
LTN1O94822 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LTN1O94822 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
LTN1O94822 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
LTN1O94822 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
LTN1O94822 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
LTN1O94822 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
LTN1O94822 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LTN1O94822 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
LTN1O94822 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC21.53■■□□□ 1.04
LTN1O94822 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC21.53■■□□□ 1.04
LTN1O94822 NME4-207ENST00000450036 985 ntTSL 3 BASIC21.53■■□□□ 1.04
LTN1O94822 CROCCP4-201ENST00000457096 498 ntBASIC21.53■■□□□ 1.04
LTN1O94822 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
LTN1O94822 AC124283.3-201ENST00000570869 594 ntBASIC21.53■■□□□ 1.04
LTN1O94822 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC21.53■■□□□ 1.04
LTN1O94822 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC21.53■■□□□ 1.04
LTN1O94822 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
LTN1O94822 RNF216P1-203ENST00000404404 2427 ntBASIC21.53■■□□□ 1.04
LTN1O94822 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LTN1O94822 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LTN1O94822 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
LTN1O94822 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC21.52■■□□□ 1.04
LTN1O94822 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LTN1O94822 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms