Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.79■□□□□ 0.28
CDH16O75309 AC233702.3-201ENST00000578656 1387 ntBASIC16.79■□□□□ 0.28
CDH16O75309 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CDH16O75309 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH16O75309 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.79■□□□□ 0.28
CDH16O75309 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDH16O75309 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH16O75309 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
CDH16O75309 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH16O75309 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH16O75309 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH16O75309 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH16O75309 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH16O75309 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.79■□□□□ 0.28
CDH16O75309 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.79■□□□□ 0.28
CDH16O75309 RCN1P2-201ENST00000398357 915 ntBASIC16.79■□□□□ 0.28
CDH16O75309 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH16O75309 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.79■□□□□ 0.28
CDH16O75309 MINOS1P3-201ENST00000457048 203 ntBASIC16.79■□□□□ 0.28
CDH16O75309 FAM86EP-206ENST00000510506 987 ntBASIC16.79■□□□□ 0.28
CDH16O75309 AC096582.2-201ENST00000510860 516 ntBASIC16.79■□□□□ 0.28
CDH16O75309 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.79■□□□□ 0.28
CDH16O75309 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.79■□□□□ 0.28
CDH16O75309 BNIP3P18-201ENST00000593976 575 ntBASIC16.79■□□□□ 0.28
CDH16O75309 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CDH16O75309 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH16O75309 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CDH16O75309 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CDH16O75309 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH16O75309 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.78■□□□□ 0.28
CDH16O75309 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.78■□□□□ 0.28
CDH16O75309 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.78■□□□□ 0.28
CDH16O75309 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CDH16O75309 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDH16O75309 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH16O75309 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.78■□□□□ 0.28
CDH16O75309 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH16O75309 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDH16O75309 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH16O75309 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDH16O75309 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDH16O75309 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDH16O75309 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH16O75309 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
CDH16O75309 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDH16O75309 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CDH16O75309 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.78■□□□□ 0.28
CDH16O75309 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.78■□□□□ 0.28
CDH16O75309 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.78■□□□□ 0.28
CDH16O75309 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH16O75309 MPDU1-223ENST00000582151 728 ntBASIC16.78■□□□□ 0.28
CDH16O75309 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.78■□□□□ 0.28
CDH16O75309 Z69720.1-201ENST00000601483 472 ntBASIC16.78■□□□□ 0.28
CDH16O75309 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.78■□□□□ 0.28
CDH16O75309 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.78■□□□□ 0.28
CDH16O75309 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.78■□□□□ 0.28
CDH16O75309 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDH16O75309 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDH16O75309 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH16O75309 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDH16O75309 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDH16O75309 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDH16O75309 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH16O75309 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH16O75309 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH16O75309 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.78■□□□□ 0.28
CDH16O75309 AC006058.4-201ENST00000624016 1670 ntBASIC16.78■□□□□ 0.28
CDH16O75309 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH16O75309 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.78■□□□□ 0.28
CDH16O75309 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDH16O75309 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH16O75309 PRAL-201ENST00000624952 3286 ntBASIC16.78■□□□□ 0.28
CDH16O75309 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH16O75309 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CDH16O75309 AC079776.2-201ENST00000641154 1609 ntBASIC16.78■□□□□ 0.28
CDH16O75309 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH16O75309 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDH16O75309 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDH16O75309 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH16O75309 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDH16O75309 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.77■□□□□ 0.28
CDH16O75309 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH16O75309 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDH16O75309 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.77■□□□□ 0.28
CDH16O75309 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.77■□□□□ 0.28
CDH16O75309 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.77■□□□□ 0.28
CDH16O75309 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.28
CDH16O75309 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH16O75309 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH16O75309 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CDH16O75309 AC069224.1-201ENST00000566372 1715 ntBASIC16.77■□□□□ 0.28
CDH16O75309 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH16O75309 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH16O75309 PCED1CP-201ENST00000419887 785 ntBASIC16.77■□□□□ 0.28
CDH16O75309 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.77■□□□□ 0.28
CDH16O75309 BX276092.5-203ENST00000456199 560 ntBASIC16.77■□□□□ 0.28
CDH16O75309 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.77■□□□□ 0.28
CDH16O75309 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH16O75309 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.77■□□□□ 0.28
CDH16O75309 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms