Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC19.24■□□□□ 0.67
CTNND1O60716 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTNND1O60716 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTNND1O60716 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTNND1O60716 DFFBP1-201ENST00000433250 979 ntBASIC19.24■□□□□ 0.67
CTNND1O60716 PTPA-220ENST00000436883 532 ntTSL 4 BASIC19.24■□□□□ 0.67
CTNND1O60716 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC19.24■□□□□ 0.67
CTNND1O60716 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CTNND1O60716 RN7SL618P-201ENST00000477850 296 ntBASIC19.24■□□□□ 0.67
CTNND1O60716 NAA50-208ENST00000497255 789 ntTSL 5 BASIC19.24■□□□□ 0.67
CTNND1O60716 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
CTNND1O60716 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC19.24■□□□□ 0.67
CTNND1O60716 AC010336.2-201ENST00000564226 506 ntBASIC19.24■□□□□ 0.67
CTNND1O60716 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC19.24■□□□□ 0.67
CTNND1O60716 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CTNND1O60716 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
CTNND1O60716 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTNND1O60716 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CTNND1O60716 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTNND1O60716 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
CTNND1O60716 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CTNND1O60716 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
CTNND1O60716 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTNND1O60716 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CTNND1O60716 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CTNND1O60716 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CTNND1O60716 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.23■□□□□ 0.67
CTNND1O60716 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CTNND1O60716 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CTNND1O60716 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTNND1O60716 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CTNND1O60716 AL391825.1-201ENST00000457671 1364 ntBASIC19.23■□□□□ 0.67
CTNND1O60716 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC19.23■□□□□ 0.67
CTNND1O60716 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.23■□□□□ 0.67
CTNND1O60716 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTNND1O60716 AC098614.1-201ENST00000368528 745 ntBASIC19.23■□□□□ 0.67
CTNND1O60716 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CTNND1O60716 GNAQP1-201ENST00000444815 1067 ntBASIC19.23■□□□□ 0.67
CTNND1O60716 NOP2-220ENST00000545915 630 ntTSL 2 BASIC19.23■□□□□ 0.67
CTNND1O60716 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC19.23■□□□□ 0.67
CTNND1O60716 AL512361.1-201ENST00000554200 418 ntBASIC19.23■□□□□ 0.67
CTNND1O60716 AC061975.2-201ENST00000581722 295 ntBASIC19.23■□□□□ 0.67
CTNND1O60716 AL359881.2-201ENST00000602973 570 ntBASIC19.23■□□□□ 0.67
CTNND1O60716 AL008721.1-201ENST00000609964 604 ntBASIC19.23■□□□□ 0.67
CTNND1O60716 AC106820.2-201ENST00000563775 3264 ntBASIC19.23■□□□□ 0.67
CTNND1O60716 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTNND1O60716 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC19.23■□□□□ 0.67
CTNND1O60716 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTNND1O60716 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTNND1O60716 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC19.23■□□□□ 0.67
CTNND1O60716 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTNND1O60716 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTNND1O60716 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTNND1O60716 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CTNND1O60716 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC19.22■□□□□ 0.67
CTNND1O60716 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.22■□□□□ 0.67
CTNND1O60716 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.22■□□□□ 0.67
CTNND1O60716 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTNND1O60716 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTNND1O60716 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTNND1O60716 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CTNND1O60716 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CTNND1O60716 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTNND1O60716 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC19.22■□□□□ 0.67
CTNND1O60716 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC19.22■□□□□ 0.67
CTNND1O60716 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.22■□□□□ 0.67
CTNND1O60716 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.22■□□□□ 0.67
CTNND1O60716 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.22■□□□□ 0.67
CTNND1O60716 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTNND1O60716 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC19.22■□□□□ 0.67
CTNND1O60716 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTNND1O60716 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC19.22■□□□□ 0.67
CTNND1O60716 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CTNND1O60716 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTNND1O60716 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CTNND1O60716 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CTNND1O60716 AC138969.3-201ENST00000546612 1459 ntBASIC19.22■□□□□ 0.67
CTNND1O60716 AC138932.2-201ENST00000548268 1459 ntBASIC19.22■□□□□ 0.67
CTNND1O60716 AC126755.4-201ENST00000549796 1459 ntBASIC19.22■□□□□ 0.67
CTNND1O60716 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTNND1O60716 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTNND1O60716 KRT8P12-202ENST00000472924 1397 ntBASIC19.21■□□□□ 0.67
CTNND1O60716 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CTNND1O60716 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTNND1O60716 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CTNND1O60716 AL645728.1-201ENST00000366221 2101 ntBASIC19.21■□□□□ 0.67
CTNND1O60716 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.21■□□□□ 0.67
CTNND1O60716 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTNND1O60716 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTNND1O60716 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTNND1O60716 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTNND1O60716 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC19.21■□□□□ 0.67
CTNND1O60716 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTNND1O60716 AC087499.6-201ENST00000411576 835 ntBASIC19.21■□□□□ 0.67
CTNND1O60716 SPDYE17-201ENST00000412399 783 ntBASIC19.21■□□□□ 0.67
CTNND1O60716 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CTNND1O60716 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC19.21■□□□□ 0.67
CTNND1O60716 AC104794.3-201ENST00000566840 1248 ntBASIC19.21■□□□□ 0.67
CTNND1O60716 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CTNND1O60716 AC026979.3-201ENST00000607315 403 ntBASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms