Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
LDB2O43679 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
LDB2O43679 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.55■□□□□ 0.24
LDB2O43679 AC018695.7-201ENST00000624587 2492 ntBASIC16.55■□□□□ 0.24
LDB2O43679 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LDB2O43679 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.55■□□□□ 0.24
LDB2O43679 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
LDB2O43679 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.55■□□□□ 0.24
LDB2O43679 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LDB2O43679 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LDB2O43679 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LDB2O43679 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LDB2O43679 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LDB2O43679 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.55■□□□□ 0.24
LDB2O43679 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LDB2O43679 PGAM5P1-201ENST00000518923 814 ntBASIC16.55■□□□□ 0.24
LDB2O43679 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.55■□□□□ 0.24
LDB2O43679 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.55■□□□□ 0.24
LDB2O43679 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.55■□□□□ 0.24
LDB2O43679 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LDB2O43679 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
LDB2O43679 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LDB2O43679 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.55■□□□□ 0.24
LDB2O43679 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LDB2O43679 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LDB2O43679 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.55■□□□□ 0.24
LDB2O43679 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.55■□□□□ 0.24
LDB2O43679 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
LDB2O43679 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LDB2O43679 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LDB2O43679 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LDB2O43679 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LDB2O43679 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LDB2O43679 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.54■□□□□ 0.24
LDB2O43679 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LDB2O43679 AC023274.1-201ENST00000418278 595 ntBASIC16.54■□□□□ 0.24
LDB2O43679 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.54■□□□□ 0.24
LDB2O43679 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.54■□□□□ 0.24
LDB2O43679 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LDB2O43679 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.54■□□□□ 0.24
LDB2O43679 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LDB2O43679 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LDB2O43679 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LDB2O43679 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.54■□□□□ 0.24
LDB2O43679 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.54■□□□□ 0.24
LDB2O43679 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.54■□□□□ 0.24
LDB2O43679 AL078644.1-201ENST00000609881 752 ntBASIC16.54■□□□□ 0.24
LDB2O43679 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.54■□□□□ 0.24
LDB2O43679 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
LDB2O43679 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
LDB2O43679 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
LDB2O43679 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.54■□□□□ 0.24
LDB2O43679 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LDB2O43679 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LDB2O43679 REXO1L8P-201ENST00000604378 1897 ntBASIC16.54■□□□□ 0.24
LDB2O43679 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LDB2O43679 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LDB2O43679 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LDB2O43679 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LDB2O43679 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LDB2O43679 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LDB2O43679 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
LDB2O43679 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LDB2O43679 AC016027.1-202ENST00000607927 1699 ntBASIC16.53■□□□□ 0.24
LDB2O43679 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
LDB2O43679 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
LDB2O43679 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LDB2O43679 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LDB2O43679 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LDB2O43679 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LDB2O43679 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.53■□□□□ 0.24
LDB2O43679 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
LDB2O43679 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LDB2O43679 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.53■□□□□ 0.24
LDB2O43679 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.53■□□□□ 0.24
LDB2O43679 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.53■□□□□ 0.24
LDB2O43679 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LDB2O43679 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.53■□□□□ 0.24
LDB2O43679 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.53■□□□□ 0.24
LDB2O43679 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LDB2O43679 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LDB2O43679 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LDB2O43679 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.53■□□□□ 0.24
LDB2O43679 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.53■□□□□ 0.24
LDB2O43679 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
LDB2O43679 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LDB2O43679 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
LDB2O43679 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.53■□□□□ 0.24
LDB2O43679 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LDB2O43679 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.53■□□□□ 0.24
LDB2O43679 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LDB2O43679 AC005622.1-201ENST00000636801 1703 ntBASIC16.53■□□□□ 0.24
LDB2O43679 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LDB2O43679 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LDB2O43679 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LDB2O43679 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.53■□□□□ 0.24
LDB2O43679 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
LDB2O43679 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
LDB2O43679 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
LDB2O43679 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms