Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.73■□□□□ 0.75
FOXN1O15353 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC19.73■□□□□ 0.75
FOXN1O15353 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXN1O15353 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXN1O15353 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
FOXN1O15353 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
FOXN1O15353 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
FOXN1O15353 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
FOXN1O15353 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FOXN1O15353 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
FOXN1O15353 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FOXN1O15353 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FOXN1O15353 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
FOXN1O15353 ANKRD19P-201ENST00000338192 862 ntBASIC19.72■□□□□ 0.75
FOXN1O15353 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC19.72■□□□□ 0.75
FOXN1O15353 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
FOXN1O15353 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC19.72■□□□□ 0.75
FOXN1O15353 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FOXN1O15353 HLA-V-204ENST00000476601 1289 ntBASIC19.72■□□□□ 0.75
FOXN1O15353 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
FOXN1O15353 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC19.72■□□□□ 0.75
FOXN1O15353 COG4-212ENST00000564653 590 ntTSL 5 BASIC19.72■□□□□ 0.75
FOXN1O15353 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
FOXN1O15353 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC19.72■□□□□ 0.75
FOXN1O15353 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.72■□□□□ 0.75
FOXN1O15353 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
FOXN1O15353 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FOXN1O15353 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
FOXN1O15353 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
FOXN1O15353 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
FOXN1O15353 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXN1O15353 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
FOXN1O15353 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
FOXN1O15353 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
FOXN1O15353 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXN1O15353 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXN1O15353 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXN1O15353 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC19.71■□□□□ 0.75
FOXN1O15353 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXN1O15353 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXN1O15353 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXN1O15353 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
FOXN1O15353 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXN1O15353 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC19.71■□□□□ 0.75
FOXN1O15353 SLC25A1P3-201ENST00000395415 828 ntBASIC19.71■□□□□ 0.75
FOXN1O15353 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXN1O15353 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC19.71■□□□□ 0.75
FOXN1O15353 SATB1-217ENST00000493952 626 ntTSL 3 BASIC19.71■□□□□ 0.75
FOXN1O15353 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC19.71■□□□□ 0.75
FOXN1O15353 FUZ-207ENST00000526575 482 ntTSL 4 BASIC19.71■□□□□ 0.75
FOXN1O15353 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC19.71■□□□□ 0.75
FOXN1O15353 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.71■□□□□ 0.75
FOXN1O15353 AL139327.4-201ENST00000612362 153 ntBASIC19.71■□□□□ 0.75
FOXN1O15353 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC19.71■□□□□ 0.75
FOXN1O15353 AC008267.7-201ENST00000624570 1194 ntBASIC19.71■□□□□ 0.75
FOXN1O15353 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.71■□□□□ 0.75
FOXN1O15353 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
FOXN1O15353 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.71■□□□□ 0.75
FOXN1O15353 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
FOXN1O15353 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXN1O15353 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
FOXN1O15353 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC19.71■□□□□ 0.75
FOXN1O15353 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
FOXN1O15353 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC19.71■□□□□ 0.74
FOXN1O15353 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FOXN1O15353 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FOXN1O15353 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC19.7■□□□□ 0.74
FOXN1O15353 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
FOXN1O15353 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.7■□□□□ 0.74
FOXN1O15353 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FOXN1O15353 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FOXN1O15353 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
FOXN1O15353 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FOXN1O15353 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
FOXN1O15353 AC087163.2-201ENST00000457299 853 ntBASIC19.7■□□□□ 0.74
FOXN1O15353 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC19.7■□□□□ 0.74
FOXN1O15353 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC19.7■□□□□ 0.74
FOXN1O15353 AC027307.2-201ENST00000591252 911 ntBASIC19.7■□□□□ 0.74
FOXN1O15353 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.7■□□□□ 0.74
FOXN1O15353 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
FOXN1O15353 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
FOXN1O15353 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FOXN1O15353 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FOXN1O15353 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
FOXN1O15353 AC106886.4-201ENST00000623557 2502 ntBASIC19.7■□□□□ 0.74
FOXN1O15353 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
FOXN1O15353 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FOXN1O15353 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FOXN1O15353 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
FOXN1O15353 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
FOXN1O15353 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
FOXN1O15353 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC19.69■□□□□ 0.74
FOXN1O15353 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
FOXN1O15353 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
FOXN1O15353 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
FOXN1O15353 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
FOXN1O15353 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
FOXN1O15353 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
FOXN1O15353 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC19.69■□□□□ 0.74
FOXN1O15353 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms